Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00689 ATGATGTCACGTACTGGTAGAATGACTTCGGATCTTAGCAGAACCGGTGCTGTAGAACGAGACATTGAGCAGGCTATTACTGCTTTAAAGAAAGGAGCTTACCTGCTCAAGTATGGAAGAAGGGGGAAGCCCAAGTTTTGCCCGTTCCGGCTTTCCAATGATGAATCTGTTTTGATATGGTTCTCAGGGAAAGAAGAGAAGCACCTTAAACTGAGCCATGTGTCTAGAATTATATCTGGACAACGCACGCCTATCTTTCAAAGGTATCCACGGCCTGAAAAGGAATACCAGTCATTTTCTCTTATCTACAATGATAGGTCACTGGACTTGATTTGCAAAGATAAAGATGAAGCTGAAGTTTGGTTTAGTGGTTTAAAAGCATTAATTTCACGTAGTCATCACCGAAAATGGAGGACAGAGTCAAGAAGTGATGGTATTCCATCTGAAGCTAATAGTCCTAGAACATACACCAGAAGAAGTTCTCCCATGAATTCTCCATTTGGTAGTAATGAAAGCTTGCAAAAGGATAGTGGGGATCACCTTCGGCTTCACAGTCCTTATGACAGCCCTCCTAAAAATGGTTTAGATAAAGCATTATCTGATGTGATGTTGTATGCTGTCCCACCAAAAGGTTTCTTCCCTCCAGATTCTGCAAGTGCTTCAGTCCACTCTGTGTCATCTGGAGGATCAGATAGTATGCATGGTCACATGAAGACAATGGGTATGGATGCTTTTAGAGTTAGTCTATCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGCGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGTACAGGTGATGGTGTTCTGGGCGGTGGGACTCATCGAGTTGGGAGTTCTTTGGGTGTAAAAATGGACTCTCTTTTTCCAAAAGCCTTGGAATCTGCAGTAGTTCTTGATGTACAGAATATTGCCTGCGGTGGACGACATGCGGCCTTAGTGACCAAACAAGGTGAAATTTTCTCTTGGGGGGAAGAATCAGGAGGTAGGCTTGGGCATGGTGTTGATTCTGATGTTCTCCATCCAAAGCTTATCGAAACTTTAAGCAATACAAATATTGAACTTGTAGCTTGTGGGGAATATCATACATGTGCTGTGACGCTTTCTGGTGATCTTTATACATGGGGTGATGGCACATACAATTATGGTCTTCTGGGGCATGGTAATCAAGTGAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCCCTGGAGGGCATACATGTTTCATCTATTTCTTGTGGACCGTGGCACACTGCTGTCGTAACCTCTGCTGGGCAATTGTTTACTTTTGGTGATGGTACATTTGGTGTTTTGGGTCATGGAGATCGTAAAAGTGTTTCATTACCTAGGGAAGTAGAGTCCCTCAAGGGTCTTCGTACTGTCCGGGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTTGTGGAAGTCATGGTTGGAAATTCTAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTCACTTGGGGTGATGGAGACAAAGGTCGACTTGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCAGCCCTGGTTGAACCCAATTTCTGTCAGGTTGCTTGTGGACATAGTCTGACTGTTGCGCTTACCACCTCTGGGCATGTCTATACAATGGGTAGTCCTGTCTATGGTCAGTTGGGAAATCCTCAAGCTGATGGGAAGCTACCAAGCCGTGTTGAAGGAAAGCTTTCAAAGAGTTTTGTGGAGGAGATTGCTTGTGGTGCATATCATGTTGCAGTTTTAACTTCAAGGACAGAAGTTTACACATGGGGTAAGGGTGCAAATGGTCGTTTAGGCCATGGGGATACAGATGACAGAAATGTCCCAACATTAGTAGAAGCATTGAAAGACAAACAGGTCAAAAGTGTTGCTTGTGGTACTAATTTCACTGCAGCTATCTGTCTACATAAGTGGGTATCTGGTGTTGACCAGTCTATGTGTTCTGGTTGTCGTCTTCCATTTAATTTCAAAAGAAAACGTCACAATTGTTATAATTGTGGACTTGTTTTCTGTCATTCATGTAGCAGTAAGAAATCTCTTAAGGCTTCAATGGCACCAAACCCCAACAAACCTTATCGCGTCTGTGACAACTGTTTTAATAAACTAAGGAAATCTATGGAAACTGATTCTTCATCCCATTCTTCTGTGAGCAGAAGAGGAAGTATCGTTCCAGGGTCACTTGAGTTAATTGATAAGGATGATAAAATGGATTCAAGATCTCGTAGTCAACTTGCTAGGTTTTCTTCAATGGAGTCCTTGAAGCAAGTGGATAGTAGATCTTCTAAAAAAAACAAGAAGTTGGAATTCAACAGTAGTCGCGTCTCTCCTGTTCCAAATGGGGGTTCACAATGGGGAGCACTGAATATTTCTAAATCTTTTAATCCTGTTTTTGGATCATCAAAGAAGTTCTTCTCAGCATCTGTTCCTGGATCTAGAATTGTTTCCCGAGCAACATCTCCAATATCTAGACGACCTAGTCCACCACGTTCAACTACTCCAACTCCAACACTGGGAGGTCTTACTTCCCCAAAGATAGTTGTGGATGATGCTAAGAGGACCAATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGACAGCAGGTGGAAAACCTGACTAGGAAAGCGCAACTTCAAGAAGTTGAGTTGGAAAGGACAACCAAACAGCTAAAAGATGCTATAGCAATTGCTGGAGAGGAAACTGCGAAGTGCAAAGCAGCAAAGGAAGTGATCAAATCTCTTACCGCTCAGTTGAAGGACATGGCTGAGAGGCTACCTGTAGGAGCAGCTAGGAATGTCAAATCGCCTTCTCTTGCTTCCATTGGTTCCAATGAGCTTAGCTATGCTTCCATTGATCGATTGAATCTTCAAGCAACAAGCCCAGAAGCAGATTTAACTGGATCAAATAATCAGTTGCTTTCAAATGGATCCAGCACTGCCAGCAACCGTAGTAGTGCTGGTCACAATAAACAGAACCAGTCAGAGGTAACTAACAAAAATGGGAGCAGAACAAAGGAGAGCGAATCCCGGAGTGAGAATGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACACTCACCTCCCTTCCTGGAGGCGTAATAGATCTTAAGAGAGTTCGCTTCAGGTATTAA 3195 0.4341 MMSRTGRMTSDLSRTGAVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPMNSPFGSNESLQKDSGDHLRLHSPYDSPPKNGLDKALSDVMLYAVPPKGFFPPDSASASVHSVSSGGSDSMHGHMKTMGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGTHRVGSSLGVKMDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIETLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPSRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNVPTLVEALKDKQVKSVACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKSMETDSSSHSSVSRRGSIVPGSLELIDKDDKMDSRSRSQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRQQVENLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGAARNVKSPSLASIGSNELSYASIDRLNLQATSPEADLTGSNNQLLSNGSSTASNRSSAGHNKQNQSEVTNKNGSRTKESESRSENEWVEQDEPGVYITLTSLPGGVIDLKRVRFRY 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00689 1064 MobiDBLite consensus disorder prediction 144 174 - -
Arst7g00689 1064 FunFam PH, RCC1 and FYVE domains-containing protein 1 240 491 - -
Arst7g00689 1064 Pfam FYVE zinc finger 658 724 IPR000306 GO:0046872
Arst7g00689 1064 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 424 434 IPR000408 -
Arst7g00689 1064 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 662 724 IPR017455 -
Arst7g00689 1064 CDD PH_PLC_plant-like 20 130 - -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 554 605 IPR000408 -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 383 437 IPR000408 -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 836 865 - -
Arst7g00689 1064 Pfam Pleckstrin homology domain 23 129 IPR001849 -
Arst7g00689 1064 SUPERFAMILY PH domain-like 21 129 - -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 981 1037 - -
Arst7g00689 1064 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 662 736 IPR013083 -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 791 805 - -
Arst7g00689 1064 Coils Coil 924 944 - -
Arst7g00689 1064 FunFam PH, RCC1 and FYVE domains-containing protein 1 492 663 - -
Arst7g00689 1064 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 317 327 IPR000408 -
Arst7g00689 1064 Pfam Unstructured region between BRX_N and BRX domain 958 1026 - -
Arst7g00689 1064 CDD FYVE_like_SF 667 720 - -
Arst7g00689 1064 ProSiteProfiles BRX domain profile. 1033 1064 IPR013591 -
Arst7g00689 1064 Gene3D - 573 661 IPR009091 -
Arst7g00689 1064 Gene3D - 393 572 IPR009091 -
Arst7g00689 1064 Gene3D - 242 392 IPR009091 -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 136 193 - -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 1021 1037 - -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 748 805 - -
Arst7g00689 1064 SUPERFAMILY RCC1/BLIP-II 268 659 IPR009091 -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 269 330 IPR000408 -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 606 657 IPR000408 -
Arst7g00689 1064 SUPERFAMILY FYVE/PHD zinc finger 658 729 IPR011011 -
Arst7g00689 1064 Gene3D - 20 138 IPR011993 -
Arst7g00689 1064 MobiDBLite consensus disorder prediction 981 1020 - -
Arst7g00689 1064 Pfam Transcription factor regulating root and shoot growth via Pin3 1032 1063 IPR013591 -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 331 382 IPR000408 -
Arst7g00689 1064 Pfam Transcription factor BRX N-terminal domain 919 952 IPR027988 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 607 654 IPR000408 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 331 379 IPR000408 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 382 434 IPR000408 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 501 550 IPR000408 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 438 486 IPR000408 -
Arst7g00689 1064 Pfam Regulator of chromosome condensation (RCC1) repeat 553 602 IPR000408 -
Arst7g00689 1064 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 65 944 - -
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 502 553 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 333 349 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 314 327 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 543 561 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 424 440 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 440 454 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 383 399 IPR000408 -
Arst7g00689 1064 PRINTS Chromosome condensation regulator RCC1 signature 601 622 IPR000408 -
Arst7g00689 1064 FunFam Putative E3 ubiquitin-protein ligase HERC1 664 732 - -
Arst7g00689 1064 Coils Coil 868 909 - -
Arst7g00689 1064 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 476 486 IPR000408 -
Arst7g00689 1064 SMART fyve_4 656 725 IPR000306 GO:0046872
Arst7g00689 1064 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 438 489 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00689 Arst-Chr7 4561156 4568143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00689 928 1062 Major Intrinsic Protein MIP AT1G31880 32.653 1.62e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00689 - - gmx:100806439 1842.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00689 7 4561156 4568143 Arst7g00689 7 4561156 4568143 ECH