Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00676 ATGTTAACCACAATCCTCAGAAGAACTTCTTCTTCTGCTATCACGAAGCGCGCTCTCGCCGCCGCCGTAACCTCCACTACCGACCCCTTTCTCCACCGACTCACCTCTTCCTCCGCCGCCTCCGGAGATTCACCCGTCGGCGAGCTGCGACGATTCTCCGGGTTAACTGGTTTTTTGAAAGGGAGAGCCTTTCACTCTAATTCAGGGCCATTGAATTTCCGCTCCTCGTTCTGTTCTCGCGCGGAGTTTGCAGTTGAGGATTACGCCTACGAAGAAGGGTCTAGAGGGAACAGCGCCGATGAAGGTCTTGAGATCGCGAAGCTTGGGATTTCGCAGGATATTGTTTCTGCTCTTGCAAAGAAAGGAATCTTCAAGCTGTTTCCTATTCAGAAAGCTGTGCTGGAACCTGCTATGCAAGGACGTGATATGATTGGTCGAGCAAGAACAGGAACTGGAAAGACTCTTGCGTTTGGGATACCAATCATAGATAAGATCATTCAGTTCAATGCTAAGCATGGGCGAGGAAGGAATCCCTTGGCTTTGGTTTTGGCTCCTACCAGAGAGCTTGCACGACAGGTTGAGAAGGAATTCCAGGAAGCAGCACCTAACTTGGATACCATCTGTGTTTACGGGGGTACACCCATCTCTCGTCAGATGAGGCAGCTTGATTACGGTGTTGATATTGCTGTAGGCACGCCTGGCCGAATCATCGACCTTCTAAACAGAGGTGCCCTGAATTTACAGGAAGTTCAGTATGTTGTTCTCGATGAAGCTGATCAGATGCTTCAAGTTGGCTTTCAAGAAGATGTCGAAAAGATCTTGGAGAGGTTGCCCCCTAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCTTCTTGGATAAAGCAGATTACTCGTAACTACCTACAAGATCCCCTGACCATTGATCTTGTTGGAGAATCTGATCAGAAGTTGGCAGATGGAATTTCACTATATTCTATTGGAACTGATATGTATGTTAAAGCAGGAATTCTCGGACCTCTAATAACAGAACATGCAAAAGGAGGAAAATGCATTGTTTTCACACAAACCAAACGTGACGCCGATCGATTAACATATGGCTTGGCAAAAACTGTTCAATGTGAGGCCTTGCATGGAGACATATCCCAAGCTCAGAGGGAAAGAACTCTGGCTGGATTCAGAAATGGACATTTTAACGTTTTGGTTGCAACAGATGTTGCTTCACGTGGGCTTGATATACCCAATGTGGATCTTGTAATACACTTTGATCTTCCCAATTCTTCGGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCTATTCTTGTTTATACAGAAGATCAGTCCAGGGCTGTTAAGACCATTGAGCGTGATGTGGGATGTAGATTTTTAGAGCTACCAAGGATTGCTGTTGATCCTGGATCAGTGGACATGGGTGGTGGACGATTTGGTTCTTATGGAGGTGGAAGGGATCGTCGATCTGGTGATTCAGGTTTTGGTCGTAGTCCTGGATTTGGTCGTTCAGGCGGCTATGGAAACTCTGGGTTTGGCCGCTCTAGCTATGGGAATTCTGGGTCAACTTCTAGTCGTTTTGGTGACTCTGGTATGAGTCGACCCAGGGGGGGATTTTCAGGTGATTCATCTGGGGGATCAGGCTTTGGTCGGTTTGGCTCCTCTGATGGCTTTGGTTCAGGTCAATCGGGGAGTAGATCCGGAGGATTCAGTCGTCCAGGGGGTTTTGGTGGTTCAGATCGTTCAGGTGGTGGTGGTTTTGGGGGATTTGGTGGTTCAGATCGTTCAGGTGGTTTTGGAGGTTTTGGCTCAAGTCAATCTAGTGCCTTTGGTGTTGCTGATCAGAACAATAAGGGAAGATTCTAA 1899 0.4729 MLTTILRRTSSSAITKRALAAAVTSTTDPFLHRLTSSSAASGDSPVGELRRFSGLTGFLKGRAFHSNSGPLNFRSSFCSRAEFAVEDYAYEEGSRGNSADEGLEIAKLGISQDIVSALAKKGIFKLFPIQKAVLEPAMQGRDMIGRARTGTGKTLAFGIPIIDKIIQFNAKHGRGRNPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLQEVQYVVLDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRNYLQDPLTIDLVGESDQKLADGISLYSIGTDMYVKAGILGPLITEHAKGGKCIVFTQTKRDADRLTYGLAKTVQCEALHGDISQAQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHFDLPNSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKTIERDVGCRFLELPRIAVDPGSVDMGGGRFGSYGGGRDRRSGDSGFGRSPGFGRSGGYGNSGFGRSSYGNSGSTSSRFGDSGMSRPRGGFSGDSSGGSGFGRFGSSDGFGSGQSGSRSGGFSRPGGFGGSDRSGGGGFGGFGGSDRSGGFGGFGSSQSSAFGVADQNNKGRF 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00676 632 FunFam ATP-dependent RNA helicase RhlE 95 311 - -
Arst7g00676 632 Gene3D - 332 478 IPR027417 -
Arst7g00676 632 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 101 480 - -
Arst7g00676 632 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 337 486 IPR001650 -
Arst7g00676 632 MobiDBLite consensus disorder prediction 520 541 - -
Arst7g00676 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 462 IPR027417 -
Arst7g00676 632 SMART helicmild6 362 442 IPR001650 -
Arst7g00676 632 MobiDBLite consensus disorder prediction 487 632 - -
Arst7g00676 632 Pfam DEAD/DEAH box helicase 127 296 IPR011545 GO:0003676|GO:0005524
Arst7g00676 632 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 134 308 IPR014001 -
Arst7g00676 632 Gene3D - 104 312 IPR027417 -
Arst7g00676 632 CDD SF2_C_DEAD 334 451 - -
Arst7g00676 632 SMART ultradead3 122 325 IPR014001 -
Arst7g00676 632 MobiDBLite consensus disorder prediction 610 632 - -
Arst7g00676 632 Pfam Helicase conserved C-terminal domain 340 442 IPR001650 -
Arst7g00676 632 CDD DEADc 114 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00676 Arst-Chr7 4467919 4471711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00676 108 474 Eukaryotic Initiation Factors Gene Family AT3G19760 32.615 8.19e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00676 - - ahf:112702088 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03127 4 107909764 107915769 Arst7g00676 7 4467919 4471711 PCT