Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00661 ATGATGAACAACAACAGCACTATTCCTGGTTGGAACTTTGAGAGTGATGCCTGTGTCATCAATCAAAAGAGTCCAATAGGGCTGGACCAAGATCTTGTAGAGCTTCTATGGAAAAATGGGCAAGTAGTATTGAGCAGCCAAACACAAAGGAAACCAGTTCAGAAAAGTGATGCATCATCAACATTAAGGAATGGTGTTCATTGTGGAAACTCAAGTAGTAATTTGAGTCAACAAGAAGATGAGACAGCTTCATGGATTCAATACCAAGTTGAGGATCATCCAATGGGACAAGAACTTTGCTCATCAAACCTTTTATCTCAATTGACACCTTGTGAAGTTGAGGCTTACAAGCCAATCAAGCAATTGGAAGAACCAAAGTTTGCAAAATTTGCTACCCCAAATGCAAATTTAAGTCCACAACAACAAAACAACAATACAAAACCGATAAATCCTATGCCTGCTCCAAGATTCCAGGTTGCTCCTGATTCATCTAATCAGAAAACCAATGACTTTGTTGGTGGATCATCATCATCACAAAAGGTTCCAAAGTTTTCTCATCATTTTTCAGCACCCGCACAACAAAAGTTTAGGGAGAAAGTTAATGGTAACAATAATGTGCTACAAAGTGAGGGTAGGGAGTGTTCAGTTATGACAGTTGGATCAAGTCACTGTGGCAGCAACAACATCATCCCTCAGGAACAAGATACTACTTTCTCCGAAGCAGTTAAAGATTGTGTTCAGAGAAGTGTTCCTAATTGGAGTAACAATAAGGGGAAATCTTCAGAGATGATTGAGGCAACTGTGACTTCATCTTCTGGTGGCTCAGGTAGTAGTCTTGGAAAAACTACTTGTTCTTTATCAACAGGAAATCATCTTAGCCTAAAGAGGAAAATCACAGATGCAGATGAATCAGAAGAACAAAGTGAGGCCACACAGCCTAAATCAGGTGTTGGAAACAAAACATCTCAGAGATCAGGATCTTCTAGAAGAAACCGTGCAGCAGAAGTGCATAACCTATCTGAAAGGAGAAGAAGAGACAGGATCAATGAGAAAATGAGAACACTCCAACAACTCATACCAAACAGTAATAAGACAGACAAAGCATCAATGCTAGAAGAGGCAATTGAATACTTGAAGTCACTTCAGTTACAGCTTCAGGTAATGTGGATGGGAGCAGGGATGACACCAGTGATGTTTCCTGGGATTCAGCATTACATGTCACAAATGAGTGCAATGGGAATGGCTGCAGCATCACAACCTTCTCTTCCTTCTATGCAAAATCCAATGCAAATACCAAGAATGCCCCTTGACCAATCCAACATTCCTTCTACTGTGTCTGTGCCTCATCATCAAACACCTTCAAACCAGGCTTTGATGTGCCAAAATCCAGTTTTGGGTGCATTTAATTACCAAAATCATCAGATGCAAAATCCATGCCTTGCAGACCAATATGCACGTTACATGGCTTATCATCATCTCATGCAAACTGCATCTCAGCCAATGAATGTATTTGGATATGGTTCCCAGGCTGTTCAGCAGAGTCAAACAATGATGCCACCCAGCAATAACAATGGGACCATGAATGTTGCACCTAATTTTGAAGATGCTATCACTGCCAAAATGGGTACTTCCACCTTTCAACAACTGAACAATAACTAA 1659 0.4051 MMNNNSTIPGWNFESDACVINQKSPIGLDQDLVELLWKNGQVVLSSQTQRKPVQKSDASSTLRNGVHCGNSSSNLSQQEDETASWIQYQVEDHPMGQELCSSNLLSQLTPCEVEAYKPIKQLEEPKFAKFATPNANLSPQQQNNNTKPINPMPAPRFQVAPDSSNQKTNDFVGGSSSSQKVPKFSHHFSAPAQQKFREKVNGNNNVLQSEGRECSVMTVGSSHCGSNNIIPQEQDTTFSEAVKDCVQRSVPNWSNNKGKSSEMIEATVTSSSGGSGSSLGKTTCSLSTGNHLSLKRKITDADESEEQSEATQPKSGVGNKTSQRSGSSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQLQLQVMWMGAGMTPVMFPGIQHYMSQMSAMGMAAASQPSLPSMQNPMQIPRMPLDQSNIPSTVSVPHHQTPSNQALMCQNPVLGAFNYQNHQMQNPCLADQYARYMAYHHLMQTASQPMNVFGYGSQAVQQSQTMMPPSNNNGTMNVAPNFEDAITAKMGTSTFQQLNNN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00661 552 MobiDBLite consensus disorder prediction 46 80 - -
Arst7g00661 552 CDD bHLH_AtPIF_like 332 395 IPR047265 -
Arst7g00661 552 SMART finulus 338 387 IPR011598 GO:0046983
Arst7g00661 552 PANTHER TRANSCRIPTION FACTOR PIF3 20 524 IPR044273 GO:0003700|GO:0006355
Arst7g00661 552 MobiDBLite consensus disorder prediction 159 183 - -
Arst7g00661 552 MobiDBLite consensus disorder prediction 250 286 - -
Arst7g00661 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 332 381 IPR011598 GO:0046983
Arst7g00661 552 FunFam Basic helix-loop-helix transcription factor 327 390 - -
Arst7g00661 552 MobiDBLite consensus disorder prediction 134 183 - -
Arst7g00661 552 MobiDBLite consensus disorder prediction 134 151 - -
Arst7g00661 552 Gene3D - 327 388 IPR036638 GO:0046983
Arst7g00661 552 MobiDBLite consensus disorder prediction 310 329 - -
Arst7g00661 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 395 IPR036638 GO:0046983
Arst7g00661 552 MobiDBLite consensus disorder prediction 330 346 - -
Arst7g00661 552 MobiDBLite consensus disorder prediction 298 346 - -
Arst7g00661 552 Pfam Helix-loop-helix DNA-binding domain 336 382 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00661 Arst-Chr7 4356697 4363648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00661 10 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 35.317 5.80e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst7g00661 HLH 6.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00661 K16189 - gmx:100811777 537.339