LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst7g00655	ATGGCCCAAGCAGGGGAGGAAGCCTACTTTAACCATAATGACGTCTCTCTTGAGGGTGAAGCCCTGCCAAGTTATTTACCTGACCATGGAAATGAGTTTTGTGATGATGGAAGTTACTTTTGTGATGCTGAAGAACCTTTAAGCGATGAAGGCATGGACGTGGATTCTGAAGCTGAAGATTTCTCTGATGATAACTTCTATGAGAACTGGGATGGCAGGTCAATTGATGGTATTGCTGACGTTGGTAGTCTTAACTTGAAGTCATTAACAGTGGATGAGATTAAGCTGCTACATTTCCCAGATCTTAATGTCGCGTTCTCTTTCTACAATTTTTATGCTAAAATGAACGGGTTTTCTGCAAGGAGGAGCAAGTTGAGGCGCAATGTTAACGGTGATGTCACACAACAGTCATTTGTCTGCTTCAGACAGGGATTTAGAGAGGTGAAATCCTATGACGAGAGCAGTCAACGTAAACGTGAGCCAAAACCGGAGACTAGATGTGGATGCCAGGCTGAGATGCGTGTTCATGTCCACATAGATACTGGGAGATGGATCGTAACATATTTCCAAGAAGTTCATAACCACGAGATGCTTGCTGATGAATTGACCTTCATGCTTCCGGGACACAGGAAGATGGATGCCAGTGCAATCGACCAAATGAACATGATGTTGAAAGTTGGGATAAAGACTCCTCAGATTTATGCATCCTTTGTCAATACAGCAGGGGGCTTCCATAATGTTCCATTTTTAAAGAGAGACATGTATAACCAAATAGACAAGCAACGAAGGCTCTTAGGTGGGGATGCCATGGCTTGCTTAAAGTTCTTGCAATCAACGGCTAAAGACGATTCCGGAATGTTTGTTCGATACTTGGCTGACAAGGAGGATCGTTTGGTGCATCTTTTTTGGTCTGACAAGTGTAGTCAATTAGATTATCATATATTTGGAGATGTGTTGGCATTTGATGCGACATATAGGAAAAATAAGTATATGTGTCCTCTAGTTGTGTTTTCTGGTGTTAATCATCATAATCAAACCATTGTGTTTGCCGCTGCTCTTATCTCAAATGAGAATGAGGATACTTATACCTGGTTATTGCAACAATTCTTGGAGTGCATGAATGGAAAAGCTCCTCAATGTGTTATCACGGATGGTCACGGAGCCATGAAGAAGGCCATTGAATCAGTGCTTCCTAGTGCCTACCACCGACTCTGTGCATGGCACTTAATTAGGAATGCAACAGCCAACCTTGGGAACCCAACCTTCACGTCCGAGTTTAAGAGATGCATGCTTTTCGATTATGAGATATCAGAGTTCCATGCTTTTACCTTTTTCTTCTTATTCTTCTTACTGCCCAAACCCTCCGAACTATTTTTCTTCTTGCTTCCTTCAATTTCATTGGCAACTTCTGGAGAAGCCTCGGTTGTGGGTGTTCCAAAGATCGAAGCTTTCGACGTCTCCCTCTTGGATAATACTGGCATTGTGGGCAGTAGAGTCAACAAGACTTTTGAGAGAATGAGAAGAAGGAGAAGACGAAGAAGGAGCATAAAAAATTGTTTGCATTAG	1566	0.424	MAQAGEEAYFNHNDVSLEGEALPSYLPDHGNEFCDDGSYFCDAEEPLSDEGMDVDSEAEDFSDDNFYENWDGRSIDGIADVGSLNLKSLTVDEIKLLHFPDLNVAFSFYNFYAKMNGFSARRSKLRRNVNGDVTQQSFVCFRQGFREVKSYDESSQRKREPKPETRCGCQAEMRVHVHIDTGRWIVTYFQEVHNHEMLADELTFMLPGHRKMDASAIDQMNMMLKVGIKTPQIYASFVNTAGGFHNVPFLKRDMYNQIDKQRRLLGGDAMACLKFLQSTAKDDSGMFVRYLADKEDRLVHLFWSDKCSQLDYHIFGDVLAFDATYRKNKYMCPLVVFSGVNHHNQTIVFAAALISNENEDTYTWLLQQFLECMNGKAPQCVITDGHGAMKKAIESVLPSAYHRLCAWHLIRNATANLGNPTFTSEFKRCMLFDYEISEFHAFTFFFLFFLLPKPSELFFFLLPSISLATSGEASVVGVPKIEAFDVSLLDNTGIVGSRVNKTFERMRRRRRRRRSIKNCLH	521

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst7g00655	521	PANTHER	OS01G0519700 PROTEIN	99	439	-	-
	Arst7g00655	521	Pfam	FAR1 DNA-binding domain	107	198	IPR004330	-
	Arst7g00655	521	Pfam	MULE transposase domain	318	412	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst7g00655	Arst-Chr7	4334060	4337582	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst7g00655		MULE	6.4e-32	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst7g00655	-		-	aip:107639801	646.351