Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00621 ATGGTTTTGAAGAAAGTTTCTTTGGTTCTGGTTCTACTTGTCATATGCAACTCTGTTGTAGAATCCTTTTCAAGTAGGAACCATGATCTCATCAACAAGAATGGTTCCTCTCTTGCAGCCATAAAGTTCCCTAATCATCCAAGCTTCAATGCTGTGACTTCTTCTGGGGACACAGGGTGTAGCTTCACAAGTTCTGCCATGAATTTAGGTGAAGAAACCAATGATGATGATGGTGATAGTGATGATGAAGGTGAGGCTTTTCTAGAAGCAAAGCCAAACAAGGAAATGGTGAAGCTTCATTTGAGACACTCAATGAACAAAGATGATGATGATGTTGATTTCACATCAAGGGATTTGACCAGAATTCAAACCCTGCATAGAAGGGCCATGGAGAAGAAGAACCAAAACACCTTCTCAAGGCTGCAAAAGGCACAGGAGAAATCCAGACCAAAGTCAAAGCATCACCACAAGCCAGAGAAGTCTCCGGCCGCGGCGGCTGCGCCACCGGATTATCTTGCAAACCAGCTTGTGGCAACCTTGGAATCTGGTGTCAGTCTTGGCTCTGGAGAGTACTTCATGGATGTGTTTATTGGTACACCTCCTAAGCATTTCTCTCTAATACTAGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGTTTAGCATGTTTTGATCAAACTGGTCCTTATTATGATCCTAGAGAATCTAGTTCCTTTAAGAACATTAGCTGTAGTGATCCGCGCTGCCAATTAGTAACCTCGCCGGATCCACCTAGGCCTTGCAAGGGTAAGGATCAGAGTTGTCCATACTTCTATTGGTATGGAGATAGCTCGAATACAACCGGTGATTTCGCCCTCGAGACCTTTACAGTTAACCTCACCACGCCTTCAGGGAAATCCGAGCTAAAGCATGTGGAGAATGTGATGTTTGGCTGTGGACATTGGAATAGAGGATTGTTTCATGGGGCTGCAGGGTTGTTAGGATTGGGGAGAGGGCCATTGTCATTTGCATCTCAGCTTCAATCCCTTTATGGCCATTCATTTTCCTATTGCCTTGTGGATAGGAATAGCAATTCTAGTGTTAGCAGCAAATTGATATTTGGTGAGGATAAGGAGCTTTTAGGCCACCCTAATTTGAACTACACTTCATTTGTTGGTGGCAAAGATAATTCAGTTGATACATTTTACTATGTTCAGATCAAATCTTTGATGGTTGATGGTGAGGTATTGGATATTCCTGAGGAAACTTGGAACTTATCAGCACAAGGTGCTGGTGGAACAATCATTGATTCTGGCACCACTTTAACTTATTTTGCTGATCCTGCTTATGACATCATTAAGGATGCATTTGTGAAGAAAATTAAGGGATATCCAATTGTTGAAGGCCTTCCACCTTTAAAGCCATGTTACAATGTGTCTGGGATTGATCAGATGGAGCTGCCAGATTTTGGGATCTTGTTTTCAGATGGAGCAGTTTGGAACTTCCCTGTGGAGAATTACTTCATCCAGATAGATCCAGATGTCGTTTGTCTGGCGATCTTAGGGACTCCCCGGCACGCCCTTTCGATCATCGGAAACTATCAGCAGCAGAATTTCCATATCCTCTATGATATGAAGAAATCAAGGCTTGGTTATGCACCAAGGAAGTGTGCTGATGTGCTAATTGGGACTCCGTACGCGCCGGTTCGTGATTCAACACTGCTGCTCACTCAGCTTCTCCGTCCGGCGCTGAAAATGGTTACTTTCAGGTTTCACCAATACCAGGTGGTGGGTAGGGCTCTTCCCACAGAGAAAGATGAGCACCCTAAGATCTACCGCATGAAGCTTTGGGCCACCAATGAGGTTCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGAAAGCTAAAGAAGGTCAAGAAGAGCAATGGGCAAGTGCTGGCCATCAATGAGATTTTCGAGAAAAATCCTACCAAGATAAACAACTATGGAATCTGGCTCCGATATCAGAGTCGCACCGGTTATCACAATATGTACAAGGAATTCCGAGACACTACCTTAAACGGTGCTGTTGAACAAATGTACAATGAGATGGCGTCGCGTCATAGGGTCAGATTTCCTTGCATCCAGATCATCAAGACGGCAACCGTCCCCGCCAAGATGTGCAAAAGGGAGAGCACCAAGCAGTTCCACAACTCTAAGATCAAGTTCCCATTGGTGTTCAAGAAGGTGAGGCCCCCAACCAGGAAGCTGAAGACAACCTACAAAGCAACCAGACCCAACCTGTTCATGTGA 2277 0.4444 MVLKKVSLVLVLLVICNSVVESFSSRNHDLINKNGSSLAAIKFPNHPSFNAVTSSGDTGCSFTSSAMNLGEETNDDDGDSDDEGEAFLEAKPNKEMVKLHLRHSMNKDDDDVDFTSRDLTRIQTLHRRAMEKKNQNTFSRLQKAQEKSRPKSKHHHKPEKSPAAAAAPPDYLANQLVATLESGVSLGSGEYFMDVFIGTPPKHFSLILDTGSDLNWIQCVPCLACFDQTGPYYDPRESSSFKNISCSDPRCQLVTSPDPPRPCKGKDQSCPYFYWYGDSSNTTGDFALETFTVNLTTPSGKSELKHVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNSSVSSKLIFGEDKELLGHPNLNYTSFVGGKDNSVDTFYYVQIKSLMVDGEVLDIPEETWNLSAQGAGGTIIDSGTTLTYFADPAYDIIKDAFVKKIKGYPIVEGLPPLKPCYNVSGIDQMELPDFGILFSDGAVWNFPVENYFIQIDPDVVCLAILGTPRHALSIIGNYQQQNFHILYDMKKSRLGYAPRKCADVLIGTPYAPVRDSTLLLTQLLRPALKMVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATVPAKMCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATRPNLFM 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00621 758 FunFam 60S ribosomal protein L18a 652 727 - -
Arst7g00621 758 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 587 708 IPR023573 GO:0003735|GO:0005840|GO:0006412
Arst7g00621 758 PRINTS Pepsin (A1) aspartic protease family signature 197 217 IPR001461 GO:0004190|GO:0006508
Arst7g00621 758 PRINTS Pepsin (A1) aspartic protease family signature 524 539 IPR001461 GO:0004190|GO:0006508
Arst7g00621 758 PRINTS Pepsin (A1) aspartic protease family signature 429 440 IPR001461 GO:0004190|GO:0006508
Arst7g00621 758 ProSiteProfiles Peptidase family A1 domain profile. 191 548 IPR033121 -
Arst7g00621 758 MobiDBLite consensus disorder prediction 126 167 - -
Arst7g00621 758 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 206 217 IPR001969 GO:0004190|GO:0006508
Arst7g00621 758 Pfam Xylanase inhibitor C-terminal 398 548 IPR032799 -
Arst7g00621 758 MobiDBLite consensus disorder prediction 66 85 - -
Arst7g00621 758 Pfam Xylanase inhibitor N-terminal 191 370 IPR032861 -
Arst7g00621 758 Coils Coil 127 147 - -
Arst7g00621 758 CDD pepsin_A_like_plant 190 552 IPR034161 -
Arst7g00621 758 Gene3D - 652 727 - -
Arst7g00621 758 Hamap 50S ribosomal protein L18Ae [rpl18a]. 586 649 IPR028877 -
Arst7g00621 758 FunFam Eukaryotic aspartyl protease family protein 166 371 - -
Arst7g00621 758 Gene3D - 577 651 - -
Arst7g00621 758 FunFam 60S ribosomal protein L18a 581 651 - -
Arst7g00621 758 Gene3D Acid Proteases 170 371 IPR021109 -
Arst7g00621 758 PANTHER OS07G0603500 PROTEIN-RELATED 129 552 - -
Arst7g00621 758 SUPERFAMILY RplX-like 651 726 - -
Arst7g00621 758 SUPERFAMILY Acid proteases 183 553 IPR021109 -
Arst7g00621 758 Gene3D Acid Proteases 372 557 IPR021109 -
Arst7g00621 758 FunFam Aspartyl protease family protein 372 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00621 Arst-Chr7 4061772 4068953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00621 580 758 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.061 1.19e-116 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00621 K22683 - zju:107416111 1062.75