Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00600 AATAATAATAATAACAATAATAATAATAATAATAATAATAAGTCTGGCATTGATGTTACTCTAATATCTGCCACCACCAAAGTTCCAAAAGCAGTTTCACCGGTTTCCTCTGCTGCTGAGGGGGAAGCCTTAAGGCGGCCGCGTGGCAGGCCTGCCGGCTCCAAGAACAAGCCGAAGCCACCAATAATTGTGACAAGGGACAGTGCTAATGCACTCAAAGCTCATGCTATGGAAGTAAGCTCTGGCTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGGAAGCAGAGAGGCCTCTGCATACTAAGTGGAACTGGCTGTGTGACAAATGTAACTCTGCGCCAACCGGCTTCATCCGGCGCCATTGTGACTCTTCACGGCCGATTCGAGATCCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACTGGCCTCACCATTTACTTGGCTGGTGCTCAGGGGCAAGTTGTAGGAGGTGCTGTTGTTGGTGCCTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTCGATCGCCTGCCATTGGAAGATGAAGAACTCACGGCTGCAATGCAGAATCAGCATTACCAAAACGGACGCACCACGCATCATCTCGATATCTCAGACTTGTATGCAATGCCACAGAACCTTCTCACCAATGGAACAATGGCACCAGAGATATATTCTTGGGCACCAGGGAGGAACTTGTCAAAAAGCTGA 756 0.4854 NNNNNNNNNNNNNKSGIDVTLISATTKVPKAVSPVSSAAEGEALRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDEELTAAMQNQHYQNGRTTHHLDISDLYAMPQNLLTNGTMAPEIYSWAPGRNLSKS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00600 251 MobiDBLite consensus disorder prediction 29 61 - -
Arst7g00600 251 FunFam AT-hook motif nuclear-localized protein 72 213 - -
Arst7g00600 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 184 IPR005175 -
Arst7g00600 251 PIRSF ESCAROLA 1 247 IPR014476 GO:0003680
Arst7g00600 251 ProSiteProfiles PPC domain profile profile. 69 207 IPR005175 -
Arst7g00600 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 212 IPR014476 GO:0003680
Arst7g00600 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 200 - -
Arst7g00600 251 Gene3D - 73 209 - -
Arst7g00600 251 CDD DUF296 75 155 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00600 Arst-Chr7 3957472 3958229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00600 28 250 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 74.222 7.79e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00600 - - gmx:100804941 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00600 7 3957472 3958229 Arst7g00600 7 3957472 3958229 ECH