Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00589 ATGGACAAACATTCTGGGGATTCTGCGCCAGCTCATGGTGCACCAGGTTCATCTGGGATTTCCTCACTTAGTGTTGGTAGAAAGGTGGGAAGCAGTGCATGGGGAATACCACGCGGCACTGCTGCATTTCATGCATCAAGTGACACTAGCTTGTTCTCCAGTTCGCTTCCTGTTATTGGGCATGAAAAGTTAAATTTGACTGGTTCGGGGCATTATGATCGATCTGCTGATGATAACTGGCCAAGATTAGGGAAAGTTCATAAAGATGATGTGGGGCAAGATGCACTTGAAGATATAGAAACAAAAGCAGCTGGAAAGATGCTTCCTGATGATGAAGATGAATTGTTAGCCGGGATAATGGAAGATTTCGACCTTACCAGGTTGCCGAGCCAGCTAGAGGATCTGGATGAGAATGATCTTTTTGGAAGTGTAGGAGGCTTTGAAATGGATTTTGAATCCCAAGAGAGCCTTGGTATTGGTATATCAAAGATGAGCTTATCCGATGGAGTTCCTTCAACGGCTATCGGTCAATATGCTGCACTGCCAAATGGCGTTGGAGCAGTGGCCGGGGAGCATCCTTATGGAGAGCATCCATCAAGGACCTTGTTTGTGAGGAACATCAACAGTAATGTGGAGGATTCTGAATTAAGATTGCTATTTGAGCAATATGGGGATATCAGAACATTATACACTGCTTGCAAGCATAGGGGTTTTGTAATGATATCTTACTATGACATTCGAGCTGCTCGCACAGCAATGCGTGCTTTGCAGAACAAGCCTTTGAGAAGAAGAAAACTTGATATTCATTTTTCAATTCCTAAGGATAACCCTTCTGAAAAGGATATCAACCAAGGAACACTTGTAGTATTCAATTTGGATCCATCAGTATCAAATGATGATCTTCGCCAAATATTTGGGGCTTATGGAGAAGTCAAGGAGATTAGGGAAACACCACATAAAAGACACCATAAATTTATCGAGTTTTATGATGTTAGAGCAGCAGAGGCTGCTCTTAAAGCATTGAATAGAAGTGATATTGCTGGAAAACGTATCAAACTTGAACCCAGCCGTCCCGGTGGAGCACGTCGAAACTTGATGCAACAATTGAGTCAAGAGCTAGAGCAAGATGATGCTCGAACTTTCAGACATCATGTGGGTTCACCTGTAGCTAGTTCACCTCCCGGTAACTGGGCACAATTTGGTAGCCCGGTTGAACATAGTCCAGGTTTGAATATTGGGAGCCCAATGAATACCAACCAAATGTCTGGATTGGCTGCAATTCTTTCGCCACATGCATCAACCTCTTCAAAGATTGCACCAATTGGAAAAGACCCTGGAAGAACTAATAATCCAAATCCGATATTCGGAAGCTCTGGACCAATACAAGGAGCTGGCTTTCAGCATTCTATGTCCTTCCCTGACCAAAAAGTAACTGCAAGTCCTAGGCCTATATCTACTGTTGGCGAATCAAGTTCGAGTTCTTCGAGTATTGGAATGTTGTCTGGTCCTCAATTTTTGTGGGGAAGTCCAACTACCTACTCAGAACATTCAAACACATCTGCTTGGTCTTCATCATCTCAGGGGCTTCCATTTAATTCTAGTGGACAAAGGCAGGGTTTCCCTTATACTAGTCGGCACAATTCTTTTCTTGGTTCTCACCTCCATCACCATGTTGGTTCTGCTCCATCTGGTCTTACTTTCGATAGGCAGTTTAGCTACTTTCCCGAGTCACATGAAACTTCAATCAAGAGCTCAAATGCATTTGGGAGTTTAAATCATGGTGATGGGAATTTCTTGATGAACATGGGTCCTCATGCCTCTCTAGGAGCTGGTGTTGGCCTTTCAGGAAATGCAACCGAAATTGGTTCACCTAATTTCAGAATGATGTCACCACTGCCTAGACTTGGTTCATTGTTCCTTGGAAATGGTTCATATTCTGGACTAGGAGCAGCCAACTCTGAGTTGTTAACTGAACGTGGTAGAACTAGGCGACCTGATAATAATGGGAACCAAATTGATGGCAAGAAGCAGTACCAGCTTGATCTGGACAAAATTATGAGCGGGGAAGACACAAGGACTACATTAATGATTAAAAACATTCCTAATAAGTACACTTCAAAGATGCTCCTTGCTGCAATTGATGAGGATCACATGGGAAGCTATGACTTTTTGTATTTGCCGATTGACTTTAAGAACAAGTGTAATGTGGGCTATGCTTTCATCAATATGGTGTCTCCTTCACACATCATCCCCTTCTATAAGGCATTTAATGGGAAGAAGTGGGAAAAGTTCAACAGTGAAAAAGTTGCTTCACTAGCTTATGCGCGAATCCAAGGAAAGGGTGCACTTGTGACACATTTTCAGAATTCAAGCCTAATGAATGAGGATAAACGGTGTCGGCCAATTCTCTTCCATTCAGAGGGCCAAGAGATTGGTGACCAGGAACATTTCCTCTCAAGCAATTTGAATATATGTATTCGTCAACCGGATGGGTCTTACTCAGGTGATTTGTTGGAGAGCCCGAAGGGCAATTCGGATGAAAACTAG 2547 0.4307 MDKHSGDSAPAHGAPGSSGISSLSVGRKVGSSAWGIPRGTAAFHASSDTSLFSSSLPVIGHEKLNLTGSGHYDRSADDNWPRLGKVHKDDVGQDALEDIETKAAGKMLPDDEDELLAGIMEDFDLTRLPSQLEDLDENDLFGSVGGFEMDFESQESLGIGISKMSLSDGVPSTAIGQYAALPNGVGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRLLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDDARTFRHHVGSPVASSPPGNWAQFGSPVEHSPGLNIGSPMNTNQMSGLAAILSPHASTSSKIAPIGKDPGRTNNPNPIFGSSGPIQGAGFQHSMSFPDQKVTASPRPISTVGESSSSSSSIGMLSGPQFLWGSPTTYSEHSNTSAWSSSSQGLPFNSSGQRQGFPYTSRHNSFLGSHLHHHVGSAPSGLTFDRQFSYFPESHETSIKSSNAFGSLNHGDGNFLMNMGPHASLGAGVGLSGNATEIGSPNFRMMSPLPRLGSLFLGNGSYSGLGAANSELLTERGRTRRPDNNGNQIDGKKQYQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDEDHMGSYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYKAFNGKKWEKFNSEKVASLAYARIQGKGALVTHFQNSSLMNEDKRCRPILFHSEGQEIGDQEHFLSSNLNICIRQPDGSYSGDLLESPKGNSDEN 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00589 848 FunFam MEI2-like protein 5 isoform 2 189 283 - -
Arst7g00589 848 SMART rrm1_1 201 269 IPR000504 GO:0003723
Arst7g00589 848 SMART rrm1_1 286 354 IPR000504 GO:0003723
Arst7g00589 848 SMART rrm1_1 694 770 IPR000504 GO:0003723
Arst7g00589 848 SUPERFAMILY RNA-binding domain, RBD 694 778 IPR035979 GO:0003676
Arst7g00589 848 CDD RRM1_MEI2_like 199 275 IPR034453 -
Arst7g00589 848 PANTHER RNA RECOGNITION MOTIF-CONTAINING 11 810 - -
Arst7g00589 848 MobiDBLite consensus disorder prediction 450 497 - -
Arst7g00589 848 FunFam Protein MEI2-like 1 284 379 - -
Arst7g00589 848 Gene3D - 284 382 IPR012677 -
Arst7g00589 848 Pfam RNA recognition motif 2 692 788 IPR007201 -
Arst7g00589 848 Gene3D - 189 283 IPR012677 -
Arst7g00589 848 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 202 266 IPR000504 GO:0003723
Arst7g00589 848 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 287 352 IPR000504 GO:0003723
Arst7g00589 848 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 200 273 IPR000504 GO:0003723
Arst7g00589 848 MobiDBLite consensus disorder prediction 435 497 - -
Arst7g00589 848 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 285 358 IPR000504 GO:0003723
Arst7g00589 848 MobiDBLite consensus disorder prediction 516 544 - -
Arst7g00589 848 CDD RRM3_MEI2_like 695 780 IPR034454 -
Arst7g00589 848 MobiDBLite consensus disorder prediction 1 25 - -
Arst7g00589 848 CDD RRM2_MEI2_like 284 354 - -
Arst7g00589 848 SUPERFAMILY RNA-binding domain, RBD 197 360 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00589 Arst-Chr7 3894533 3900184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00589 195 393 Eukaryotic Initiation Factors Gene Family AT3G16380 25.000 1.38e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00589 - - gmx:100812324 1365.13