Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00588 ATGGACAAACATTCTGGGGATTCTGCGCCAGCTCATGGTGCACCAGCTGTTTTTATAGGTTCATCTGGGATTTCCTCACTTAGTGTTGGTAGAAAGGTGGGAAGCAGTGCATGGGGAATACCACGCGGCACTGCTGCATTTCATGCATCAAGTGACACTAGCTTGTTCTCCAGTTCGCTTCCTGTTATTGGGCATGAAAAGTTAAATTTGACTGGTTCGGGGCATTATGATCGATCTGCTGATGATAACTGGCCAAGATTAGGGAAAGTTCATAAAGATGATGTGGGGCAAGATGCACTTGAAGATATAGAAACAAAAGCAGCTGGAAAGATGCTTCCTGATGATGAAGATGAATTGTTAGCCGGGATAATGGAAGATTTCGACCTTACCAGGTTGCCGAGCCAGCTAGAGGATCTGGATGAGAATGATCTTTTTGGAAGTGTAGGAGGCTTTGAAATGGATTTTGAATCCCAAGAGAGCCTTGGTATTGGTATATCAAAGATGAGCTTATCCGATGGAGTTCCTTCAACGGCTATCGGTCAATATGCTGCACTGCCAAATGGCGTTGGAGCAGTGGCCGGGGAGCATCCTTATGGAGAGCATCCATCAAGGACCTTGTTTGTGAGGAACATCAACAGTAATGTGGAGGATTCTGAATTAAGATTGCTATTTGAGCAATATGGGGATATCAGAACATTATACACTGCTTGCAAGCATAGGGGTTTTGTAATGATATCTTACTATGACATTCGAGCTGCTCGCACAGCAATGCGTGCTTTGCAGAACAAGCCTTTGAGAAGAAGAAAACTTGATATTCATTTTTCAATTCCTAAGGATAACCCTTCTGAAAAGGATATCAACCAAGGAACACTTGTAGTATTCAATTTGGATCCATCAGTATCAAATGATGATCTTCGCCAAATATTTGGGGCTTATGGAGAAGTCAAGGAGATTAGGGAAACACCACATAAAAGACACCATAAATTTATCGAGTTTTATGATGTTAGAGCAGCAGAGGCTGCTCTTAAAGCATTGAATAGAAGTGATATTGCTGGAAAACGTATCAAACTTGAACCCAGCCGTCCCGGTGGAGCACGTCGAAACTTGATGCAACAATTGAGTCAAGAGCTAGAGCAAGATGATGCTCGAACTTTCAGACATCATGTGGGTTCACCTGTAGCTAGTTCACCTCCCGGTAACTGGGCACAATTTGGTAGCCCGGTTGAACATAGTCCAGGTTTGAATATTGGGAGCCCAATGAATACCAACCAAATGTCTGGATTGGCTGCAATTCTTTCGCCACATGCATCAACCTCTTCAAAGATTGCACCAATTGGAAAAGACCCTGGAAGAACTAATAATCCAAATCCGATATTCGGAAGCTCTGGACCAATACAAGGAGCTGGCTTTCAGCATTCTATGTCCTTCCCTGACCAAAAAGTAACTGCAAGTCCTAGGCCTATATCTACTGTTGGCGAATCAAGTTCGAGTTCTTCGAGTATTGGAATGTTGTCTGGTCCTCAATTTTTGTGGGGAAGTCCAACTACCTACTCAGAACATTCAAACACATCTGCTTGGTCTTCATCATCTCAGGGGCTTCCATTTAATTCTAGTGGACAAAGGCAGGGTTTCCCTTATACTAGTCGGCACAATTCTTTTCTTGGTTCTCACCTCCATCACCATGTTGGTTCTGCTCCATCTGGTCTTACTTTCGATAGGCAGTTTAGCTACTTTCCCGAGTCACATGAAACTTCAATCAAGAGCTCAAATGCATTTGGGAGTTTAAATCATGGTGATGGGAATTTCTTGATGAACATGGGTCCTCATGCCTCTCTAGGAGCTGGTGTTGGCCTTTCAGGAAATGCAACCGAAATTGGTTCACCTAATTTCAGAATGATGTCACCACTGCCTAGACTTGGTTCATTGTTCCTTGGAAATGGTTCATATTCTGGACTAGGAGCAGCCAACTCTGAGTTGTTAACTGAACGTGGTAGAACTAGGCGACCTGATAATAATGGGAACCAAATTGATGGCAAGAAGCAGTACCAGCTTGATCTGGACAAAATTATGAGCGGGGAAGACACAAGGACTACATTAATGATTAAAAACATTCCTAATAAGTACACTTCAAAGATGCTCCTTGCTGCAATTGATGAGGATCACATGGGAAGCTATGACTTTTTGTATTTGCCGATTGACTTTAAGAACAAGTGTAATGTGGGCTATGCTTTCATCAATATGGTGTCTCCTTCACACATCATCCCCTTCTATAAGGCATTTAATGGGAAGAAGTGGGAAAAGTTCAACAGTGAAAAAGTTGCTTCACTAGCTTATGCGCGAATCCAAGGAAAGGGTGCACTTGTGACACATTTTCAGAATTCAAGCCTAATGAATGAGGATAAACGGTGTCGGCCAATTCTCTTCCATTCAGAGGGCCAAGAGATTGGTGACCAGGAACATTTCCTCTCAAGCAATTTGAATATATGTATTCGTCAACCGGATGGGTCTTACTCAGGTGATTTGTTGGAGAGCCCGAAGGGCAATTCGGATGAAAACTAG 2559 0.4299 MDKHSGDSAPAHGAPAVFIGSSGISSLSVGRKVGSSAWGIPRGTAAFHASSDTSLFSSSLPVIGHEKLNLTGSGHYDRSADDNWPRLGKVHKDDVGQDALEDIETKAAGKMLPDDEDELLAGIMEDFDLTRLPSQLEDLDENDLFGSVGGFEMDFESQESLGIGISKMSLSDGVPSTAIGQYAALPNGVGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRLLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDDARTFRHHVGSPVASSPPGNWAQFGSPVEHSPGLNIGSPMNTNQMSGLAAILSPHASTSSKIAPIGKDPGRTNNPNPIFGSSGPIQGAGFQHSMSFPDQKVTASPRPISTVGESSSSSSSIGMLSGPQFLWGSPTTYSEHSNTSAWSSSSQGLPFNSSGQRQGFPYTSRHNSFLGSHLHHHVGSAPSGLTFDRQFSYFPESHETSIKSSNAFGSLNHGDGNFLMNMGPHASLGAGVGLSGNATEIGSPNFRMMSPLPRLGSLFLGNGSYSGLGAANSELLTERGRTRRPDNNGNQIDGKKQYQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDEDHMGSYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYKAFNGKKWEKFNSEKVASLAYARIQGKGALVTHFQNSSLMNEDKRCRPILFHSEGQEIGDQEHFLSSNLNICIRQPDGSYSGDLLESPKGNSDEN 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00588 852 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 289 362 IPR000504 GO:0003723
Arst7g00588 852 FunFam Protein MEI2-like 1 288 383 - -
Arst7g00588 852 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 206 270 IPR000504 GO:0003723
Arst7g00588 852 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 291 356 IPR000504 GO:0003723
Arst7g00588 852 SMART rrm1_1 205 273 IPR000504 GO:0003723
Arst7g00588 852 SMART rrm1_1 290 358 IPR000504 GO:0003723
Arst7g00588 852 SMART rrm1_1 698 774 IPR000504 GO:0003723
Arst7g00588 852 CDD RRM1_MEI2_like 203 279 IPR034453 -
Arst7g00588 852 MobiDBLite consensus disorder prediction 454 501 - -
Arst7g00588 852 Pfam RNA recognition motif 2 696 792 IPR007201 -
Arst7g00588 852 Gene3D - 288 386 IPR012677 -
Arst7g00588 852 FunFam MEI2-like protein 5 isoform 2 193 287 - -
Arst7g00588 852 Gene3D - 193 287 IPR012677 -
Arst7g00588 852 PANTHER RNA RECOGNITION MOTIF-CONTAINING 53 814 - -
Arst7g00588 852 MobiDBLite consensus disorder prediction 439 501 - -
Arst7g00588 852 SUPERFAMILY RNA-binding domain, RBD 698 782 IPR035979 GO:0003676
Arst7g00588 852 MobiDBLite consensus disorder prediction 520 548 - -
Arst7g00588 852 CDD RRM3_MEI2_like 699 784 IPR034454 -
Arst7g00588 852 CDD RRM2_MEI2_like 288 358 - -
Arst7g00588 852 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 204 277 IPR000504 GO:0003723
Arst7g00588 852 SUPERFAMILY RNA-binding domain, RBD 201 364 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00588 Arst-Chr7 3894533 3900184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00588 199 397 Eukaryotic Initiation Factors Gene Family AT3G16380 25.000 1.48e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00588 - - gmx:100812324 1356.66