Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00570 ATGGAACTTCCAAATCAAGCACCGGAAGAAGGATCCTCACAACATCATCAGAAGAAGATGGGAAGAGGCAAGATTGAGATCAAGAGGATTGAAAACACTACCAACCGCCAAGTCACGTTCTGTAAGCGCCGCAACGGCTTGCTCAAGAAAGCTTATGAGCTCTCCGTCCTCTGTGACGCCGAGGTCGCCCTCGTCGTCTTCTCCAGCCGCGGCCGCCTCTACGATGTTAGAGGAACTATCGAAAGGTATAAGAAAGCAAGTGCTGCTTCCTCAAACACAGAATCTGTATCTGAAGCTAATACACAGCAAGAATCGTCCAAACTAAGAAGACAGATTCGTGATATTCAAAATCTAAATAGGCACATCCTTGGTGAAGCTCTTAGCTCCCTGAGCCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTCGATCTAGAAAGCATGAAACGTTGTTTGCTGATGTGGAGTTCATGCAAAAGCGGGAAATTGAGCTGCAAAACCATAACAATTATCTGCGAGCTAAGATAGCTGAACATGAGAGAGCACAGCAGCAACAACAACAGGAACAAGAGCAGCAGAATTTGATGCATGGGAACATGTGTGAAGATCAGTCCACCATAGCGTCACAAACATATGACAGGAATTTCTTCCCAGTAAATCTCTTAGATTCCAATAATCATCAATATTCACGCCAAGATCACACTGCACTCCAGCTTGTCTGA 741 0.448 MELPNQAPEEGSSQHHQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYDVRGTIERYKKASAASSNTESVSEANTQQESSKLRRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADVEFMQKREIELQNHNNYLRAKIAEHERAQQQQQQEQEQQNLMHGNMCEDQSTIASQTYDRNFFPVNLLDSNNHQYSRQDHTALQLV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00570 246 ProSiteProfiles MADS-box domain profile. 20 75 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 SMART madsneu2 20 79 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 MobiDBLite consensus disorder prediction 1 27 - -
Arst7g00570 246 MobiDBLite consensus disorder prediction 86 108 - -
Arst7g00570 246 PANTHER SERUM RESPONSE FACTOR HOMOLOG 20 195 - -
Arst7g00570 246 FunFam MADS-box transcription factor 21 32 93 - -
Arst7g00570 246 Pfam K-box region 95 182 IPR002487 GO:0003700|GO:0005634|GO:0006355
Arst7g00570 246 Coils Coil 132 152 - -
Arst7g00570 246 Gene3D - 32 111 IPR036879 GO:0003677|GO:0046983
Arst7g00570 246 CDD MADS_MEF2_like 21 92 IPR033896 GO:0000977|GO:0045944
Arst7g00570 246 MobiDBLite consensus disorder prediction 12 27 - -
Arst7g00570 246 Coils Coil 171 200 - -
Arst7g00570 246 SUPERFAMILY SRF-like 20 88 IPR036879 GO:0003677|GO:0046983
Arst7g00570 246 ProSiteProfiles K-box domain profile. 98 188 IPR002487 GO:0003700|GO:0005634|GO:0006355
Arst7g00570 246 Coils Coil 98 118 - -
Arst7g00570 246 PRINTS MADS domain signature 42 57 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 PRINTS MADS domain signature 22 42 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 PRINTS MADS domain signature 57 78 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 29 74 IPR002100 GO:0003677|GO:0046983
Arst7g00570 246 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00570 Arst-Chr7 3758932 3765354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00570 9 246 MADS-box Gene Family AT3G58780 65.873 2.49e-105 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Arst7g00570 K-box 4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00570 K09264 - gmx:100792224 363.229