Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00538 ATGATCTGCACGGTGAAACAACCCGGAATAACAGGGATCAGAGGCTCCGGGCTTGTTTTCCGTGAAAAGGGTTCAACCCGGGTTCAGTCACGGCGTCTTGTTTTGCCTTCCATGATCACAAGAGAGAAGAGATCACAGAGATCTCTTGTTTCGGTGCAAAAGCCACTGCACCTTTCTGCTGTTATTGGTGGTGTTGGGAACCTTTCAGTGAGGCGTGAGAGGAGTGAGTTTGTGACTTGTGGTGCATATGAGGCTGATAGATCAGAGGTTGAAGGAGCAGGAGCTTCTTCTCCTAAGGTTCCATCAGAGGCAGCTAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTGGTGTTCAATATATATAACAAGAAGGTGTTGAATGCTTACCCTTACCCTTGGCTCACTTCAACACTCTCACTTGCATGTGGTTCTCTCATGATGTTGATTTCATGGGCCACAAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGACCTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCAGCAACAGTTAGTATGTCAAAGGTTGCAGTATCATTCACTCATATCATCAAGAGTGGGGAACCTGCTTTCAGTGTACTGGTTTCCAGATTTATCTTGGGTGAAACCTTTCCGGTGCCGGTTTATTTGTCTTTGATTCCGATCATCGGTGGATGTGCGCTTGCCGCTGTGACTGAGCTCAATTTCAACATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTTTTCCGTAACATCTTTTCAAAGAAGGGAATGAAGGGAAATTCTGTCAGCGGAATGAATTACTACGCTTGTTTATCTATGTTGTCATTGGTAATTCTCACACCATTTGCAATTGCTGTGGAGGGGCCACAGATGTGGGCAGCTGGATGGCAAACCGCCCTCTCGCAGATCGGACCTCAGTTTATATGGTGGTTGGCGGCTCAGAGCGTATTTTATCATCTGTACAATCAGGTGTCCTACATGTCTCTAGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAGCGTATATCTGTTATAGTTTCTTCAATCATTATCTTCCATACACCAGTTCAACCCGTCAATGCACTCGGAGCTGCCATCGCTATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1206 0.4511 MICTVKQPGITGIRGSGLVFREKGSTRVQSRRLVLPSMITREKRSQRSLVSVQKPLHLSAVIGGVGNLSVRRERSEFVTCGAYEADRSEVEGAGASSPKVPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWLAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00538 401 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 109 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
Arst7g00538 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 244 - -
Arst7g00538 401 Pfam Triose-phosphate Transporter family 109 397 IPR004853 -
Arst7g00538 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 300 398 - -
Arst7g00538 401 PANTHER SOLUTE CARRIER FAMILY 35 109 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00538 Arst-Chr7 3581404 3585013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00538 1 400 Antiporters AT5G54800 76.675 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00538 K15283 - gmx:732659 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00597 4 4199237 4201878 Arst7g00538 7 3581404 3585013 ECH
Arst7g00538 7 3581404 3585013 Arst7g00538 7 3581404 3585013 ECH
Arst1g00883 1 8909697 8912942 Arst7g00538 7 3581404 3585013 PCT