Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00457 ATGGAAGGTATTGTGGTGAGAAGGGTCATTCCCTCGGATAACAGTTGCCTCTTTAATGCAGTTGGATATGTGATGGATCGTGATCAAACGAAAGCAGCTGAGCTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCGCAGAAATATTCTGAAGCATTTCTTGGGAAGCCGAATGCAGAGTACTGTAACTGGATTCTTGACACAGAGAAATGGGGAGGTGCGATTGAACTTTCAATATTGGCGGATTATTATGGACGCGAGATTGCTGCATATGATATCCAAACATCGAGATGTGACTTGTATGGTCAGGAAAAGGGTTATTCGGAAAGGGTGATGCTTATTTATGATGGTCTCCACTATGATGCTTTAGCTGTGTCGCCCTTTGAGGGTGCTCCCGAGGACTTCGATCAGACGATATTTGCCGTACAGAAAGACAGAAGCATTGGACCTGTTGAGGGGCTTGCTCTTAATTTTGTTAAGGACCAACAGAGGAAGAGGAGATTCACCGACACCGCCAACTTCACCTTGCGCTGTGGTGTATGTCAAATCGGAGTTGTTGGTCAGAAGGAAGCTGTGGAGCATGCACAAGCAACCGGTCATGTTAACTTCCAAGAGTATAGATGA 627 0.4561 MEGIVVRRVIPSDNSCLFNAVGYVMDRDQTKAAELRQVIAATVASDPQKYSEAFLGKPNAEYCNWILDTEKWGGAIELSILADYYGREIAAYDIQTSRCDLYGQEKGYSERVMLIYDGLHYDALAVSPFEGAPEDFDQTIFAVQKDRSIGPVEGLALNFVKDQQRKRRFTDTANFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00457 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
Arst7g00457 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Arst7g00457 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 206 - -
Arst7g00457 208 CDD OTU_plant_OTU1_2-like 3 166 - -
Arst7g00457 208 Gene3D - 1 173 - -
Arst7g00457 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Arst7g00457 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00457 Arst-Chr7 2881320 2885608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00457 1 208 C2H2 Transcription Factor Family AT1G50670 83.654 8.91e-134 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00457 K13719 - zju:107432084 394.045