Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00455 ATGGTGGCAACAAGGTGTAAGGAGGTTTTCTTTGGAATATTCATGGAAGCCATGGAAACAATTCTTTATGCTGCATTCACTGTTATTCTAGCACTAGGAGGATCAATAGTAGGAACAATAGCAGGAGGAATCAAAGGGCAAACAACAGAAGCTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAGTTACAGGAGCCATTGCTGCCATTGAATTGTTGAACTTTAGAGCCATTGATGACCCTTTAACCAAGATGAACACAGCAGAAACAAGTTCACAGAGAGAAGTATCATCAAATATTTATGAAAACAAAGGGGTTACAGGGATGGCACAGAGTGTAATTCTGAAGCTTCCATTTCAGAAATTTAAATCCAATAAGAAACTAATGTACATGTCAAGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGAAGAATTGATTAGGATACTTCCAAAATGTGGCCACATTTTTCATTTACAATGTATAGACAAATGGTTAATCCAACAAGGATCATGCCCTATGTGTAGAACTCATGTTTCTTCTTATCACATTCATGACTTGTAG 561 0.3797 MVATRCKEVFFGIFMEAMETILYAAFTVILALGGSIVGTIAGGIKGQTTEAGFLDGAGKGAVTGAIAAIELLNFRAIDDPLTKMNTAETSSQREVSSNIYENKGVTGMAQSVILKLPFQKFKSNKKLMYMSSCSICFQDFEDEELIRILPKCGHIFHLQCIDKWLIQQGSCPMCRTHVSSYHIHDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00455 186 CDD RING-H2_EL5-like 132 175 - -
Arst7g00455 186 SUPERFAMILY RING/U-box 132 180 - -
Arst7g00455 186 Pfam Ring finger domain 132 175 IPR001841 -
Arst7g00455 186 SMART ring_2 133 174 IPR001841 -
Arst7g00455 186 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Arst7g00455 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 184 IPR013083 -
Arst7g00455 186 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 3 73 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00455 Arst-Chr7 2871988 2874457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00455 2 178 C3H Transcription Factor Family AT5G66070 30.374 4.52e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00455 - K19041 gmx:100305612 225.328