Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00454 ATGGTGGCAACAAGGTGTAAGGAGGTTTTCTTTGGAATATTCATGGAAGCCATGGAAACAATTCTTTATGCTGCATTCACTGTTATTCTAGCACTAGGAGGATCAATAGTAGGAACAATAGCAGGAGGAATCAAAGGGCAAACAACAGAAGCTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAGTTACAGGAGCCATTGCTGCCATTGAATTGTTGAACTTTAGAGCCATTGATGACCCTTTAACCAAGGCACTGATGAGCAGTTTATTAAATGGGAAAATCTTTATGGAATGGATATGTCCAGCTGTTGCTCAAGCCTATCACTTGCATATGAACACAGCAGAAACAAGTTCACAGAGAGAAGTATCATCAAATATTTATGAAAACAAAGGGGTTACAGGGATGGCACAGAGTGTAATTCTGAAGCTTCCATTTCAGAAATTTAAATCCAATAAGAAACTAATGTACATGTCAAGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGAAGAATTGATTAGGATACTTCCAAAATGTGGCCACATTTTTCATTTACAATGTATAGACAAATGGTTAATCCAACAAGGATCATGCCCTATGTGTAGAACTCATGTTTCTTCTTATCACATTCATGACTTGTAG 642 0.3816 MVATRCKEVFFGIFMEAMETILYAAFTVILALGGSIVGTIAGGIKGQTTEAGFLDGAGKGAVTGAIAAIELLNFRAIDDPLTKALMSSLLNGKIFMEWICPAVAQAYHLHMNTAETSSQREVSSNIYENKGVTGMAQSVILKLPFQKFKSNKKLMYMSSCSICFQDFEDEELIRILPKCGHIFHLQCIDKWLIQQGSCPMCRTHVSSYHIHDL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00454 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 3 205 IPR044523 -
Arst7g00454 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 211 IPR013083 -
Arst7g00454 213 CDD RING-H2_EL5-like 159 202 - -
Arst7g00454 213 SUPERFAMILY RING/U-box 159 207 - -
Arst7g00454 213 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Arst7g00454 213 SMART ring_2 160 201 IPR001841 -
Arst7g00454 213 Pfam Ring finger domain 159 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00454 Arst-Chr7 2871838 2874457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00454 2 205 C3H Transcription Factor Family AT5G66070 34.579 1.55e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00454 - K19041 gmx:100305612 279.641