Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00448 ATGAAGAATTCAGTGGAAGCCGGAAAGGCCTCAAATGTGACGAACCATGCAAGTGTGAATGGGATGCGCAGGGAATTGATGAGGCTTCCTAATTCACATCAAGCTGATACATCCAACCAGTATACTGCCAACCATAATGATGATTTCATTGAATCAGAATCTGACAGACAGATGCTTCTTATGAAAAAACAGGATGAGGAGTTGGATGAGCTTAGTTTAAGTGTACAAAGAATTGGAGGTGTTGGACTTACGATACATGAAGAACTCCTTGCACAGGAAAAGATTATAGATGAACTGGGTAATGAGATGGACAGTACATCCAATCGTCTAGATTTCGTACAAAAAAAAGTGGCAATGGTGATGAAGAAAGCTAGTGCAAAGGGTCAGATCATGATGATATTGGGTTTGCTGGCACTGTTTATTTTCCTATTCATCTTGGTGTTCTTCACCTAA 453 0.4018 MKNSVEAGKASNVTNHASVNGMRRELMRLPNSHQADTSNQYTANHNDDFIESESDRQMLLMKKQDEELDELSLSVQRIGGVGLTIHEELLAQEKIIDELGNEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILVFFT 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00448 150 PANTHER GOLGI SNARE BET1-RELATED 32 147 - -
Arst7g00448 150 Pfam SNARE domain 95 146 IPR000727 -
Arst7g00448 150 CDD SNARE_Qc 61 118 - -
Arst7g00448 150 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 58 120 IPR000727 -
Arst7g00448 150 Coils Coil 96 116 - -
Arst7g00448 150 Gene3D - 65 129 - -
Arst7g00448 150 SMART tSNARE_6 53 120 IPR000727 -
Arst7g00448 150 SUPERFAMILY SNARE fusion complex 56 120 - -
Arst7g00448 150 FunFam syntaxin-61 isoform X1 61 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00448 Arst-Chr7 2793148 2796098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00448 1 150 SNARE and Associated Proteins AT1G28490 68.667 7.21e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00448 K08500 - gmx:100787129 206.068