Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00446 ATGCCCTCAGCTCAAGATCCATTCTACGTTGTCAAAGAGGAGATTCAAGATTCCATTGATAAGTTGCAATCTTCTTATCACCAATGGGAAAGCACTTCTGACGGTGGGGATCGAACAAATCTCTCAAAGGAAGTTCTTACTGCTTGTGAGAGCATTGAATGGCAGGTATACCTATTGCATATGCAGAACCACGCACACACTACCTTAAAGGTGGATGAATTGGACAAAGCGATTTCTGTTGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAGGTCGAGATTGAAAACCGGAGAAGGTGGACCAGCAGTGCTCGCACTCAGGTGCGCACAATGAAGAATTCAGTGGAAGCCGGAAAGGCCTCAAATGTGACGAACCATGCAAGTGTGAATGGGATGCGCAGGGAATTGATGAGGCTTCCTAATTCACATCAAGCTGATACATCCAACCAGTATACTGCCAACCATAATGATGATTTCATTGAATCAGAATCTGACAGACAGATGCTTCTTATGAAAAAACAGGATGAGGAGTTGGATGAGCTTAGTTTAAGTGTACAAAGAATTGGAGGTGTTGGACTTACGATACATGAAGAACTCCTTGCACAGGAAAAGATTATAGATGAACTGGGTAATGAGATGGACAGTACATCCAATCGTCTAGATTTCGTACAAAAAAAAGTGGCAATGGTGATGAAGAAAGCTAGTGCAAAGGGTCAGATCATGATGATATTGGGTTTGCTGGCACTGTTTATTTTCCTATTCATCTTGGTGTTCTTCACCTAA 786 0.4237 MPSAQDPFYVVKEEIQDSIDKLQSSYHQWESTSDGGDRTNLSKEVLTACESIEWQVYLLHMQNHAHTTLKVDELDKAISVASRDPSWYGIDEVEIENRRRWTSSARTQVRTMKNSVEAGKASNVTNHASVNGMRRELMRLPNSHQADTSNQYTANHNDDFIESESDRQMLLMKKQDEELDELSLSVQRIGGVGLTIHEELLAQEKIIDELGNEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILVFFT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00446 261 Gene3D - 176 240 - -
Arst7g00446 261 SMART tSNARE_6 164 231 IPR000727 -
Arst7g00446 261 Coils Coil 12 32 - -
Arst7g00446 261 Coils Coil 207 227 - -
Arst7g00446 261 Pfam SNARE domain 206 257 IPR000727 -
Arst7g00446 261 SUPERFAMILY SNARE fusion complex 167 231 - -
Arst7g00446 261 CDD SNARE_Qc 172 229 - -
Arst7g00446 261 PANTHER GOLGI SNARE BET1-RELATED 139 258 - -
Arst7g00446 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 169 231 IPR000727 -
Arst7g00446 261 FunFam syntaxin-61 isoform X1 172 233 - -
Arst7g00446 261 Pfam Syntaxin 6, N-terminal 6 113 IPR015260 GO:0016020|GO:0048193
Arst7g00446 261 CDD SNARE_NTD_AtSYP61-like 5 117 - -
Arst7g00446 261 SUPERFAMILY t-snare proteins 5 117 IPR010989 GO:0016020|GO:0016192
Arst7g00446 261 Gene3D - 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00446 Arst-Chr7 2793137 2796098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00446 67 261 SNARE and Associated Proteins AT1G28490 70.256 2.31e-96 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00446 K08500 - gmx:100793612 358.607