Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00437 ATGATTTCTGGAAGATGTGCTGCTTGCAAAAATCAAAGAAGAAAATGCCCTTCTAATTGTATTTTTTCTCCATATTTTCCTGCCAATGATCCTCAAAAATTTGCTTGTGTCCACAAAATCTATGGTGGCAGTAATGTTGGAAGAATGCTTCAGGGAGTCCCAACCTATCTAAGAGAACAAGCTGCAAATGCATTGTATTTAGAAGCAAAATGGAGGATTGATGACCCTATTTATGGATGTGTTGGCATTATCTCTTCATTCTATGAACAAATTCAAAATGCAGAAATTGAGCTAGCAAAAATTCAAACTCAGGTTGCTTTCTATAAACTCCAAACCCAACATGTTGAAGCTGAACCAAATTTGGAGGTTTTGCAATCACAAAGCATCAATATGGAGCAGTTTGAGTCGGACAATCCAACTATAACTTCTTGGTTCAATTGA 441 0.3651 MISGRCAACKNQRRKCPSNCIFSPYFPANDPQKFACVHKIYGGSNVGRMLQGVPTYLREQAANALYLEAKWRIDDPIYGCVGIISSFYEQIQNAEIELAKIQTQVAFYKLQTQHVEAEPNLEVLQSQSINMEQFESDNPTITSWFN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00437 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Arst7g00437 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 128 - -
Arst7g00437 146 Coils Coil 84 111 - -
Arst7g00437 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00437 Arst-Chr7 2676394 2677496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00437 1 115 AS2 family AT3G26620 56.410 1.21e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst7g00437 LOB 1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00437 - - lang:109328513 198.749