Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00317 ATGCCGAAAGAATCGGTGTTTTCAGTTGGATCATTGCAAGAGAAGTTCCAAACAAAGTTGATGGAATCAAAAGATACAAGAATGAAGGCAACATCAGAGGTTCTTAGGAACATGAGGATCCTCAAATTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAATTCAACTCAGAAAAACTGAACAAATGTGGCTAAAAAAATTTGTTTACACTTCAGCCATGACCACATTTGTGTTTTGGGGTGCTCCAACATTTGTTTCTGTTGTTACTTTTGGCACCTGCATGCTTGTAGGGATTCCACTTGAATCAGGGAAAATCTTATCAGCACTTGCTACATTCAGAATTCTTCAAGAGCCTATATACAATCTTCCAGAAACAATTTCAATGATTGCACAAACTAAGGTTTCTCTTGATAGGATTTCGTTGTTCCTTCGCCTCGAAGACTTGCAATTCGATGTTGTAGAGAAGCTTCCATTAGGTACTTCTGATAAAGCTATTGAAGTAACTAACGGAAACTTCTCTTGGGATTTATCTTCTTCAGTTACAACATTGAAGAACATAAATCTAAGTGTTTTTCATGGCATGAAAGTTGCTGTTTGTGGCACTGTTGGATCAGGAAAATCTACATTACTCTCTTGTATATTAGGAGAAGTACCAAAGGTTTCAGGAACTCTAAAAGTGTGTGGTAAGAAAGCATATGTTGCTCAATCACCATGGATACAAAGTGGGAAAATTGAAGATAATATATTGTTTGGTAAGAAGATGGATAGGGAAAAGTATGAGAAGATTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGACTTTGTCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATTTGAGTGGTGGACAAAAACAAAGGATTCAAATAGCTCGTGCTTTATATCAAGATTCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGTTCTCATCTCTTTAAGGAATGTTTGTTAGGCCATTTGAGTTCAAAGACAGTAGTTTATGTTACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTCATGAAAATTGGAAAAATTACTCAATGTGGAAAGTATATTGAATTGCTTAACAATGGAACTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCCACACTTGATTCAACAAGTACCTTTGAACAAGATATTAGTGTCTCTAATGCTCATGTTGTGGAACAAAAAGAGGCAAGAAAAGATGATCAAATTGGTAATAAAATAGACATCAATGATCATAGTGAGCCAAAAGGCCAGCTAGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTTGATATATTGGAAATACATCACCACAGCATATAGAGGGATTCTTGTTCCATTCATATTGTTGGCTCAGATTCTGTTCCAAACTCTCCAAATTGGAAGCAACTATTGGATGACTTGGGCTACACCAATCTCACAAGAGGATCCATCACCTGTTGAAGGATCAATTCTTATAATTGTTTATGTTGCTTTGGCTATTGGAAGTTCTTTCTGCATTCTTGCTAGAGCTATGCTTCTTGTTACTGCCGGTTACAAAACTGCTACACTGCTATTCAATAAGATGCACTTCTGCATTTTCCGCGCACCAATGTCATTCTTTGATTCTACTCCAAGTGGTAGAATTCTCAATAGAGCTTCTACTGACCAAAGTTCTGTTGATACTGACATTCCAAATCAAATTAGTTCAGTTGCCTTCACTCTCATACAGCTTCTTGGAATCATAGCAGTGATGTCTCAAGTTGCATGGCAAGTTTTCTTTGTATTCATACCTGTCATTGCAGCCAGCATATGGTACCAGCAATATTACTTACCAGCAGCGCGAGAACTATCGCGCTTAGTTGGAGTATGCAAAGCGCCAGTGATTCAACACTTTGCTGAAACAATCTCTGGTGCATCAACAATTAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAACAAATATGAAACTTTCGGACGAATATTCTCGGCCGAAATTCAATGTTACTGGTGCTATGGAATGGCTGTGCTTTCGCTTAGATATGTTGTCTTCAATCACATTTGCAGTTTCCTTGATATTCTTGGTATCTATTCCAAAAGGAGTCATAAATCCAAGCATTGCTGGTTTAGCTGTTACCTATGGACTAAATTTAAACATGGTGCAAGCTTGGGTTGTATGGAATCTATGCCGCTTAGAAAACAAGATCATATCGGTAGAAAGGATTATGCAGTATACTTGTGTTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAAATAGACCAGATCCTTCTTGGCCATTATATGGTGAGGTTGATATACAAAACTTGCAGGTTCGTTATGCTTCACACCTTCCACTTGTGTTGCGCGGTATCTCATGCACATTTTATGGAGGACTGAAAACTGGGATTGTTGGAAGAACAGGAAGTGGTAAATCAACTCTCATACAAACTCTATTCCGAATCGTCGAACCAGCTGCTGGGAGAGTTATGATTGATGGCATCAACATATCATCAGTAGGACTTCATGATTTGAGGTCTAGACTTGGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTTAGAAACAATTTGGACCCTCTTGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTAGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGTTGGACTCTCCAGTTAGCGAGAACGGCGAAAATTGGAGCATGGGACAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTGCTAAAGAAGAGCAAGATATTGGTTCTTGATGAAGCAACTGCATCAGTTGATACTGCTACAGACAATTTGATTCAACAAACTCTTAAGCTGCATTTTGCTGACTCTACAATCATAACCATTGCGCATAGAATCACTTCTATTCTTGACAGCAATATGGTCTTGCTTCTTCATCAAGGAGTTATTGAAGAGTATGAGTCACCTTCAAAATTGCTAGAGGATAGGTGTTCTTCTTTTTCCCAACTTGTGGCAGAATATTCCACTAGGTCCAAGTCAAGTTTTGATAAATATGTTGATCAATGA 3123 0.382 MPKESVFSVGSLQEKFQTKLMESKDTRMKATSEVLRNMRILKLQGWEMKFLSKIIQLRKTEQMWLKKFVYTSAMTTFVFWGAPTFVSVVTFGTCMLVGIPLESGKILSALATFRILQEPIYNLPETISMIAQTKVSLDRISLFLRLEDLQFDVVEKLPLGTSDKAIEVTNGNFSWDLSSSVTTLKNINLSVFHGMKVAVCGTVGSGKSTLLSCILGEVPKVSGTLKVCGKKAYVAQSPWIQSGKIEDNILFGKKMDREKYEKILEACSLKKDLETLSFGDQTIIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFKECLLGHLSSKTVVYVTHQVEFLPAADLILVMKIGKITQCGKYIELLNNGTDFMELVGAHKKALSTLDSTSTFEQDISVSNAHVVEQKEARKDDQIGNKIDINDHSEPKGQLVQEEEREKGKVGFLIYWKYITTAYRGILVPFILLAQILFQTLQIGSNYWMTWATPISQEDPSPVEGSILIIVYVALAIGSSFCILARAMLLVTAGYKTATLLFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSSVDTDIPNQISSVAFTLIQLLGIIAVMSQVAWQVFFVFIPVIAASIWYQQYYLPAARELSRLVGVCKAPVIQHFAETISGASTIRSFDQQSRFQETNMKLSDEYSRPKFNVTGAMEWLCFRLDMLSSITFAVSLIFLVSIPKGVINPSIAGLAVTYGLNLNMVQAWVVWNLCRLENKIISVERIMQYTCVPSEPPLVVEENRPDPSWPLYGEVDIQNLQVRYASHLPLVLRGISCTFYGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGRVMIDGINISSVGLHDLRSRLGIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLKLHFADSTIITIAHRITSILDSNMVLLLHQGVIEEYESPSKLLEDRCSSFSQLVAEYSTRSKSSFDKYVDQ 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00317 1040 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 9 132 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00317 1040 CDD ABCC_MRP_domain2 788 1008 - -
Arst7g00317 1040 FunFam ABC transporter C family member 5 151 398 - -
Arst7g00317 1040 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 166 389 IPR003439 GO:0005524
Arst7g00317 1040 SUPERFAMILY ABC transporter transmembrane region 469 772 IPR036640 GO:0005524|GO:0016020
Arst7g00317 1040 SUPERFAMILY ABC transporter transmembrane region 11 147 IPR036640 GO:0005524|GO:0016020
Arst7g00317 1040 Pfam ABC transporter 807 955 IPR003439 GO:0005524
Arst7g00317 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 1016 IPR027417 -
Arst7g00317 1040 FunFam ABC transporter C family member 3 773 1025 - -
Arst7g00317 1040 SMART AAA_5 816 1008 IPR003593 GO:0016887
Arst7g00317 1040 SMART AAA_5 193 366 IPR003593 GO:0016887
Arst7g00317 1040 Gene3D - 154 410 IPR027417 -
Arst7g00317 1040 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 473 753 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00317 1040 CDD ABC_6TM_ABCC_D2 471 765 IPR044726 GO:0140359
Arst7g00317 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 388 IPR027417 -
Arst7g00317 1040 Gene3D ABC transporter type 1, transmembrane domain 5 149 IPR036640 GO:0005524|GO:0016020
Arst7g00317 1040 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 1027 - -
Arst7g00317 1040 Pfam ABC transporter transmembrane region 474 715 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00317 1040 Pfam ABC transporter transmembrane region 8 119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00317 1040 Pfam ABC transporter 184 318 IPR003439 GO:0005524
Arst7g00317 1040 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 1027 - -
Arst7g00317 1040 CDD ABCC_MRP_domain1 166 366 - -
Arst7g00317 1040 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 790 1024 IPR003439 GO:0005524
Arst7g00317 1040 ProSitePatterns ABC transporters family signature. 291 305 IPR017871 GO:0005524|GO:0016887
Arst7g00317 1040 Gene3D ABC transporter type 1, transmembrane domain 434 771 IPR036640 GO:0005524|GO:0016020
Arst7g00317 1040 Gene3D - 773 1026 IPR027417 -
Arst7g00317 1040 FunFam ABC transporter C family member 5 434 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00317 Arst-Chr7 2018504 2023085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00317 166 402 Calmodulin-binding Proteins AT2G36910 31.128 4.06e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00317 - K05666 gmx:100794567 1751.87