Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00308 ATGTCTTATGTTTCCTCGTACCTTTCCCTCATGCACTCTCACATAAGCTTTCTTCTCCAACCCATTTTTCTTCATGCATTCTCAGCCATCATCCACCTCCTACTGCTGGCTATAGTTTTGGTTTCATGGCTTTGGAAGAAGATCATCACTGTTGGAGAAACTGGAGATGACTCCAATAACAAGCATCAGAAGCCTTTGAATAATGCTGTGTTAAGAAAGACTACTTTGTTTTGTTCTTTAGGTACTTCTGCTTTCAACCTTATCCTCTGCCTCTATAGTTACTACTTCTTAGGAGAAAAAGAAAAAGAAGAAGAAAAGCTCGTGACCCATTTGGATTTAGGTCTAAAAACTCTTGCTTGGGGTGTTATTAGTGTTTGCTTGCACCAAAGCTTGCTCTTATTTAGTTCAGGTGATGATAGAAGAAGATTCTCTTTCATGTTCAGAGCATGGTGTGTTTTCTACTTTTTTGTTTCATGTTACTCCTTTGTAGTGGACTTTGTTCTTCATTTTTATGAAAAGCACGTGACTTTACCAGCTCAGGACATAGTTTCTGATGTGATTTCAGCTTCTGTGGGTTTATTCTTTTGCTATGTGGTGTGTTTTGTGAAGAAAATTGATGAGTGTGAAGAGGATCATATCATTGATGATCTTCAAGATCCACTACTATTGAATAATGGTAATGCAACTGTTTGTAGTAATGCCTCTGGGGCTGACACTGTTACCCCTTTCTCAAATGCTGGCATTTTCAGCATTCTAACATTCTCTTGGGTGGGCCCTCTTGTTTCTCTTGGCAAAAAGAAAACCTTGGACCTTGAGGATGTTCCACTTCTTGATAAAAGAGATAGTGTGGTTGAAATTTTTCCAACTTTCAGAGAAAAAGTTGAAGAAGATTGTGGTGCAATTAATCACATAACCACTCTTAAACTGGTGAAGTTGTTAGTACTATCAGCATGGAAAGAGATTCTCTTCACTGCATTTCTTGCATTGTTGAATGCTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGATGGTCAAAGGGTTTATGAGAATCAAGGCTATGGTCTTGTTTCTGCATTTTTCTTATCAAACCTTGTTCAGTCCCTATCACAAAGGCATTGGTTCTTTAGGTTGCAGCTAGTTGGGATTAGAATTCAAGCACTGCTTGTGACTATGATCTATAACAAAGCCTTGACCCTTTCATGTCAATCAAAGCAGGGTCATACTTCTGGTGAAATGATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGAACCTTCACTTGGTATATGCATGATTTGTGGAGGGTAGCTTTGCAAATTGTCTTAGCTTTGTTGATTTTGTATAAAAGTGTTGGTCTTGCTTCAATTGCCGCGTTTGTGGCCACTGTTGTCGTCATGTTGGTAAATGTTCCTTTGGGAAAAATGCAACAGAAGTTTCAGAAAAACTTGATGGATTCAAAGGACACAAGAATGAAGGCAACATCTGAGATTCTAAGGAACATGAAGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAAATGAGCTTAGGAAAGCTGAGGAAGGGTGGTTAAAGAAATCTGTATACAATTCAGCTATCAGTGCTTTTGTGTTCTGGATTGCTCCGTCTTTTGTATCTGTTGTTACTTTTGGTACATGTATGGTTATGGGGATTCCACTTGAATCAGGGAAGATCTTATCAGCACTTGCTACATTTAGAATTCTTCAAGGTGCCATATATAATATTCCAGAAACAATATCAGCTATAGTACAAACTAAGGTTTCTCTTGATAGGATTTCTTCTTTCCTTCGTCTCGGTGACTTGAAATCTGATGTTGTAGAGAAGCTTCCTTTAGGTACTTCTGATAAAGCAATCGAAGTAACTAATGGAAACTTCTCTTGGGATCCATCTTCTCCAAATACAACATTGAAGAACATAAATTTTGAAGTTTTCCATGGCATGAGGGTTGCTGTTTGTGGGACAGTTGGATCAGGAAAATCTACATTGCTATCTTGTATATTGGGAGAGGTACCGAAGGTTTCGGGCACTCTAAAAGTGTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGAAAGATAGAGGATAATATACTGTTTGGTAAAGAGATGGATAAGGAAAAGTATGAGAAGGTTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGATTTTATCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATTTGAGTGGTGGACAAAAACAAAGGATTCAAATAGCACGTGCTTTATATCAAGATGCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTCTTTAAGGAATGTTTGCTAGGCCTTTTAAGATCAAAGACAGTGATTTATGTTACTCATCAAGTTGAGTTCTTACCGGCTGCTGATCTTATATTGGTAATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATGCTGATCTGCTTAACAATGGAACTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACACTTGATTCAGATGAAGGAATAATATCCAATGAAATAAGTACCTTGGAACAAGATTCAGATTTTCCTATTTCTCAGGGTGGAGAAGAAGAAGAGGAAAAGAAAGATGAGCAAAATGGTAAAACTGGTAACAAAGGTGATGAGGCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGAGAGAGTGGTAGAGTTGGATTTTCAGTGTATTGGCAATATATTACTATGGCATATGGAGGTGCTCTTGTTCCTTTCATTCTGTTGGCTCATACTCTCTTCCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACACCAATCTCACAAGATGTCGAGCCACCTGTTTCTGAAACAACTCTTATAGCAGTCTATATTGCTTTGGCTGTTGCAAGTTCTTTCTGCATTCTTGCAAGGACTACATTATTTGCCACTGCTCTATGTAAGACAGCTACCATAATCTTCAATAAGATGCACTTCTGCATTTTTCGTGCTCCAATGGCATTCTTTGATTCCACTCCAAGCGGCCGAATTCTTAATAGAGCTTCTACTGATCAAAGTTCAGTGGACACTGAGGTTCCTTATCAGTTTGCTTCATTTGTTTTTCCACTGATCCAACTTGTGGGAATTATAGCAGTGATGTCTCAAGCTGCATGGCAAGTTTTTATTGTCTTTATACCTGTGATTGCAATCAGCATTTGGTATCAGCAATATTATTTGCCAGCAGCTCGAGAACTATCGCGTTTAGTTGGAGTATGCAAAGCTCCAATCATTCAGAACTTTTCTGAGACAATTTCCGGTACACCAACCATCAGAAGCTTTGATCAGCAGTCCAGATTTCAGGAAAAGAATTTGAAACTGATCGACAGATATTCGCGACCAGAGTTCAATAGTGCTGCTGCATCTGAATGGTTGTGCTTCCGTTTAGATATATTGTCTTCTATCATCTTTGCATTTTCCTTGATATTCTTGATATCCATTCCAGAAGGATTCATAGATCCAGGCCTTGCTGGTTTATCTGTTACCTATGGACTAAATTTGACCACAATAAATGCTTGGGTGATATGGAGTCTTTGCAGTTTGGAGAACAATATTATATCAGTGGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCCCTTGTTGTCGAAGAAAATCGACCGGATCCTTCTTGGCCTTCACACGGCGAGGTTAATATACATGACTTGCAGGTTCGTTATGCTCCACACCTTCCACTTGTGTTGCATGGCCTCACATGCACATTTCGCGGAGAATGGAGAACTGGAATTGTTGGTAGAACAGGAAGTGGCAAAACAACTCTCATACAAACTCTTTTCCGAATCATTGAACCAGCTGCTGGAGAAGTTGTGATTGATGGCATCAACATCTCTTCAATAGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGGACTGTGAGAAACAATCTGGATCCACTAGAGGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGTGATGAAGTTAGAAAGAAAGAAGGAAAGCTGGACTCTCCAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGACAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTTCTGAAGAAGAGCAAGGTATTGGTACTCGACGAAGCGACTGCATCAGTTGATACTGCCACGGACAATTTAATTCAACAAACTCTTAGGTTGCATTTCACTGAGTCCACAGTCATAACCATTGCGCATAGAATCACTTCTGTTCGTGACAGCGATATGGTCTTGCTTCTTCATCAAGGACTAATTGAGGAGTATGATTCACCTTCAAAATTGCTAGAGGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACAATGAGATCTAAGTCCACTTTTCAGAAATGA 4539 0.3917 MSYVSSYLSLMHSHISFLLQPIFLHAFSAIIHLLLLAIVLVSWLWKKIITVGETGDDSNNKHQKPLNNAVLRKTTLFCSLGTSAFNLILCLYSYYFLGEKEKEEEKLVTHLDLGLKTLAWGVISVCLHQSLLLFSSGDDRRRFSFMFRAWCVFYFFVSCYSFVVDFVLHFYEKHVTLPAQDIVSDVISASVGLFFCYVVCFVKKIDECEEDHIIDDLQDPLLLNNGNATVCSNASGADTVTPFSNAGIFSILTFSWVGPLVSLGKKKTLDLEDVPLLDKRDSVVEIFPTFREKVEEDCGAINHITTLKLVKLLVLSAWKEILFTAFLALLNALASYVGPYLIDAFVQYLDGQRVYENQGYGLVSAFFLSNLVQSLSQRHWFFRLQLVGIRIQALLVTMIYNKALTLSCQSKQGHTSGEMINFMTVDAERVGTFTWYMHDLWRVALQIVLALLILYKSVGLASIAAFVATVVVMLVNVPLGKMQQKFQKNLMDSKDTRMKATSEILRNMKILKLQGWEMKFLSKINELRKAEEGWLKKSVYNSAISAFVFWIAPSFVSVVTFGTCMVMGIPLESGKILSALATFRILQGAIYNIPETISAIVQTKVSLDRISSFLRLGDLKSDVVEKLPLGTSDKAIEVTNGNFSWDPSSPNTTLKNINFEVFHGMRVAVCGTVGSGKSTLLSCILGEVPKVSGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDKEKYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNNGTDFMELVGAHKKALSTLDSDEGIISNEISTLEQDSDFPISQGGEEEEEKKDEQNGKTGNKGDEAKGQLVQEEERESGRVGFSVYWQYITMAYGGALVPFILLAHTLFQVLQIGSNYWMAWATPISQDVEPPVSETTLIAVYIALAVASSFCILARTTLFATALCKTATIIFNKMHFCIFRAPMAFFDSTPSGRILNRASTDQSSVDTEVPYQFASFVFPLIQLVGIIAVMSQAAWQVFIVFIPVIAISIWYQQYYLPAARELSRLVGVCKAPIIQNFSETISGTPTIRSFDQQSRFQEKNLKLIDRYSRPEFNSAAASEWLCFRLDILSSIIFAFSLIFLISIPEGFIDPGLAGLSVTYGLNLTTINAWVIWSLCSLENNIISVERILQYTSIPSEPPLVVEENRPDPSWPSHGEVNIHDLQVRYAPHLPLVLHGLTCTFRGEWRTGIVGRTGSGKTTLIQTLFRIIEPAAGEVVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFTESTVITIAHRITSVRDSDMVLLLHQGLIEEYDSPSKLLEDKSSSFAQLVAEYTMRSKSTFQK 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00308 1512 MobiDBLite consensus disorder prediction 892 922 - -
Arst7g00308 1512 FunFam ABC transporter C family member 3 1249 1501 - -
Arst7g00308 1512 SMART AAA_5 1291 1477 IPR003593 GO:0016887
Arst7g00308 1512 SMART AAA_5 663 836 IPR003593 GO:0016887
Arst7g00308 1512 Gene3D ABC transporter type 1, transmembrane domain 302 617 IPR036640 GO:0005524|GO:0016020
Arst7g00308 1512 Gene3D ABC transporter type 1, transmembrane domain 910 1247 IPR036640 GO:0005524|GO:0016020
Arst7g00308 1512 CDD ABC_6TM_ABCC_D2 947 1241 IPR044726 GO:0140359
Arst7g00308 1512 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 949 1229 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00308 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1496 IPR027417 -
Arst7g00308 1512 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 243 1500 - -
Arst7g00308 1512 FunFam ABC transporter C family member 5 621 868 - -
Arst7g00308 1512 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 243 1500 - -
Arst7g00308 1512 Gene3D - 622 877 IPR027417 -
Arst7g00308 1512 CDD ABC_6TM_ABCC_D1 335 610 IPR044746 GO:0140359
Arst7g00308 1512 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 859 IPR003439 GO:0005524
Arst7g00308 1512 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Arst7g00308 1512 MobiDBLite consensus disorder prediction 884 922 - -
Arst7g00308 1512 Gene3D - 1249 1502 IPR027417 -
Arst7g00308 1512 Pfam ABC transporter transmembrane region 954 1191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00308 1512 Pfam ABC transporter transmembrane region 322 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00308 1512 CDD ABCC_MRP_domain2 1264 1484 - -
Arst7g00308 1512 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1268 1500 IPR003439 GO:0005524
Arst7g00308 1512 FunFam ABC transporter C family member 10 305 618 - -
Arst7g00308 1512 CDD ABCC_MRP_domain1 636 836 - -
Arst7g00308 1512 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524|GO:0016887
Arst7g00308 1512 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst7g00308 1512 SUPERFAMILY ABC transporter transmembrane region 948 1248 IPR036640 GO:0005524|GO:0016020
Arst7g00308 1512 SUPERFAMILY ABC transporter transmembrane region 315 614 IPR036640 GO:0005524|GO:0016020
Arst7g00308 1512 FunFam ABC transporter C family member 5 910 1247 - -
Arst7g00308 1512 Pfam ABC transporter 1284 1431 IPR003439 GO:0005524
Arst7g00308 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00308 Arst-Chr7 1955353 1960939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00308 636 866 Calmodulin-binding Proteins AT2G36910 30.952 4.29e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00308 - K05666 aip:107606454 2443.69