Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00225 ATGAATTCTAGGTGCTTCCTTCCACAAGAGTCCTTATTCATCAACTCTGGCAGCATGGCTTCATTTTCTTCAAATTCTGCAGCAGCAGCAGCAGAAGATAGCAGGGTGAATAGTACCAGAAACCGGCCTCTTCCACGTGCCACCCCGCCTTCGTTTTTGGTTCAGACGGCGATGAGGGTATCGAGAGCAAGATGGTTTACCTTCTTGAGAAGAGTGTTCCATTACCAAAATGGATCAAGGTCAAACCTTGGCTCTAATCCTTTCAATACTAGAACATGGATGATGATGGAGTTTATAGCTTTAGTGGTTCAGATAATCACTATAACATTCACTTTGGCTATTTCAAAAAAGGAGAGGCCTGTTTGGCCTATGAGGATTTGGTCAGCTGGTTATGATATTGGTTGTTTTCTTAATCTGCTTCTACTTTATGGCCGGTACCGGCAAATTTGTGCAACTCAAGGAGATGTTCTTAGCTTTTCTGATATTGAACAGCAGAGAAACAATGAAGAAACCAGTGTATACAGGATTTCCCATTTGATGAACAAGTGCAGGACTTCACTTGAGCTTTTCTTTGCAATTTGGTTTGTGATGGGAAATGTTTGGGTCTTCGACTCGCGTTTTGGATCCTTTATCCAAGCTCCAAAGCTCCATGTTCTTTGCATCACACTGCTTGCATGGAATGCAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTCTGTTTCTGCTCCTGTGTTGCTGTGTGCCTCTAGCTAGCAGGCTCCTTGGCTACAACATGAACATGGGATCTTCGGACAAAGGAGCATCTGATGATCAAATCTCACAACTTCCAAGTTGGAGATACAAAGAATCACATACAAAGTTAGAGTTAGGCAACAAGGATTTCGAAGGCAGCGAGAAGTTGATCAACGAGGACNNNNNNNNNNGTATTTGCTTAGCCAAGTATAAAGATAAAGAAGAAGTTAGACAATTGCCATGTTCCCATGTGTTCCACCTTAAATGTGTGGATCAATGGCTAAAAATCATATCATGTTGTCCTCTTTGCAAACAAGGACTAGAGAAGTAG 1071 0.4052 MNSRCFLPQESLFINSGSMASFSSNSAAAAAEDSRVNSTRNRPLPRATPPSFLVQTAMRVSRARWFTFLRRVFHYQNGSRSNLGSNPFNTRTWMMMEFIALVVQIITITFTLAISKKERPVWPMRIWSAGYDIGCFLNLLLLYGRYRQICATQGDVLSFSDIEQQRNNEETSVYRISHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFIQAPKLHVLCITLLAWNAIXXXXXXXXXXXLLFLLLCCCVPLASRLLGYNMNMGSSDKGASDDQISQLPSWRYKESHTKLELGNKDFEGSEKLINEDXXXXICLAKYKDKEEVRQLPCSHVFHLKCVDQWLKIISCCPLCKQGLEK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00225 356 ProSiteProfiles Zinc finger RING-type profile. 312 351 IPR001841 -
Arst7g00225 356 SMART ring_2 310 350 IPR001841 -
Arst7g00225 356 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 32 353 - -
Arst7g00225 356 Pfam Ring finger domain 312 351 IPR001841 -
Arst7g00225 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 355 IPR013083 -
Arst7g00225 356 SUPERFAMILY RING/U-box 311 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00225 Arst-Chr7 1370828 1373923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00225 52 354 C3H Transcription Factor Family AT4G26580 65.461 8.25e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00225 - - adu:107496222 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00225 7 1370828 1373923 Arst7g00225 7 1370828 1373923 ECH