Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00217 ATGGGGTCTAACTCTGAGGTTCACTTCTCTGGATTTCACATGGATTGCCTAGAGCAAAGAAAGGCCAGCATGGAGCAACCAACAACTTCAGAAGATGATTTGTATAAACAACCTTTCGTTATAGGTGTTGCTGGTGGGGCAGCATCTGGCAAGACTGCCGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCATTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACCGAGCAGTTGCTAAGTGTCATGGACAAGTTAAAGCGTGGTCAAGCAGTAAATATTCCAAAGTATGACTTTAAGGGTTACAAAAGCGGTGTGTCTCCGGCGAGAAGGGTAAACCCTGCAGATGTTATAATTTTGGAAGGGATCCTTATTTTCCATGATCCACGTGTTCGGGCATTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGGCTCGCAAGAAGAATTAGGCGTGATACTGCCGAGAAGGCTCGTGATATTGCAACAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTCGATGACTTTATCCTTCCAACAAAGAAGTATGCTGATATAATCATACCCCGAGGAGGAGATAATCATGTGGCCATCGATTTGATTGTACAGCATATTCGAACAAAACTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATACGTCATTCAGTCAACTTTTCAGATGCGGGGTATGCATACCCTCGTACGTGATGCTAAGACAACAAAGCATGATTTTGTATTCTATTCTGACCGTTTGATCCGTTTGGTTGTAGAACATGGCCTAGGGCATCTGCCATTTACAGAAAAACAAGTAATCACTCCTACTGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGGTTGTGCGGCGTCTCCATCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGCGCATGCTGCAAAGGTATCAAGATTGGGAAGATTCTAATTCATAGAGAAGGAGACAACGGTCAACAGCTAATATATGAAAAGTTGCCGAATGATATCTCAGATAGGCATGTGTTACTCTTGGATCCTATCTTGGGCACAGGTAATTCAGCTGTTCAAGCGATTTCTTTACTATTAAGAAAGGGCGTACCAGAGTCCAATATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTTCATGTGGTCTGCAAAAGCTTTCCAAGAATAAAAATCGTGACGTCTGAGATTGACATTGGTTTGAATGAAGATTTCCGCGTTATACCTGGCATGGGAGAGTTTGGGGATAGGTATTTTGGAACAGATGATGATGACATGCAAGTTGTGGCCCCTTCTTAA 1407 0.4144 MGSNSEVHFSGFHMDCLEQRKASMEQPTTSEDDLYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFDTEQLLSVMDKLKRGQAVNIPKYDFKGYKSGVSPARRVNPADVIILEGILIFHDPRVRALMNMKIFVDTDADVRLARRIRRDTAEKARDIATVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQMRGMHTLVRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDMQVVAPS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00217 468 PRINTS Uridine kinase signature 206 219 - -
Arst7g00217 468 PRINTS Uridine kinase signature 113 128 - -
Arst7g00217 468 PRINTS Uridine kinase signature 170 180 - -
Arst7g00217 468 PRINTS Uridine kinase signature 68 79 - -
Arst7g00217 468 PRINTS Uridine kinase signature 184 195 - -
Arst7g00217 468 PRINTS Uridine kinase signature 38 55 - -
Arst7g00217 468 FunFam Uridine kinase 35 241 - -
Arst7g00217 468 CDD UMPK 40 238 IPR000764 -
Arst7g00217 468 NCBIfam uridine kinase 37 238 IPR000764 -
Arst7g00217 468 FunFam Uridine kinase 242 457 - -
Arst7g00217 468 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Arst7g00217 468 Gene3D - 242 457 IPR029057 -
Arst7g00217 468 Gene3D - 35 241 IPR027417 -
Arst7g00217 468 CDD PRTases_typeI 315 430 IPR000836 -
Arst7g00217 468 PANTHER URIDINE KINASE 32 367 - -
Arst7g00217 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 231 IPR027417 -
Arst7g00217 468 Pfam Uracil phosphoribosyltransferase 256 457 - -
Arst7g00217 468 SUPERFAMILY PRTase-like 241 458 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00217 Arst-Chr7 1309434 1315195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00217 3 460 PRT Gene Family AT4G26510 84.199 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00217 K00876 - gmx:100798205 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00217 7 1309434 1315195 Arst7g00217 7 1309434 1315195 ECH
Arst1g00443 1 4133420 4139477 Arst7g00217 7 1309434 1315195 PCT