Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00129 ATGGATGATGCCGATGGCGCCGTCGATGAAGTTGCGCGAGCACTCAATGTTGCTGATGCTCTCGGGAAGGCTGATAAATTGGACGATATTGCCCTCGGTTTGAAGGAGCTTGACATGGAACATTACGATGATGAAGATGAAGGAGTTGAGGTATTTAGTTCCGGGATTGGTGATCTTTATTATCCAAGTAACGACCTGGATCCTTATATTAAAGATAAGAACGATGATGATGACTCCGAGGAACTCGAAGACATGATCATTAATCCAACTGATTCTGTCATTGTTTGTGCTCGTACTGAGGACGATCTCAGTCTTCTCGAGGTTCATATACTTGAGGATGTCGGTACTAGTGAGATGAACATGTATGTCCATCATGATATCATAATTCCTGCATTTCCACTATCCACAGCTTGGCTTGACTGCCTTCAAGGAAGAGAGAAAGGAAACTTCTTAGCTGTTGGTTCAATGGAACCGTCAATAGAAATTTGGGACCTTGATGTTATTGATGCAGTGCAGCCATGCATGGTTTTAGGTGGCATTTCAGAGAAAAAGAAGGGGAAGAAGAAATCAATCAAATATAAAGATGACAGTCACACTGACTCTGTACTTGGTCTTGCCTGGAACAAAGCGTTCAGGAATATACTTGCTAGTGCCAGTGCTGACAAGCGAGTCAAGATTTGGGATGTGGCTACTGGGAAGTGTGAGAGTACAATGGAGCATCACTCAGACAAGGTTCAAGCAGTTGCCTGGAATCATCGTGAACCAAAAATTCTTCTTAGTGGTTCATTTGATCATACTGTGGTCCTGAGGGATGGAAGGATGCCATCTCATCCTGGTTATAAGTGGTCAGTCACAGCTGATGTCGAGAGCTTGGCCTGGGATCCACACACTGAGCACTATTTTGTGGTGAGTCTCGAGGATGGTACTGTCAAGTGTTTTGATGTTCGGACCGCAAAGTCTGAATCCACATCTGATCTAAGTTCTACATTTACTCTTCATGCACATGACAAAGCTGTTACCTCAGTATCCTATAACGTCTCAGCACCTAATCTACTTGCTACTGGATCGATGGACAAAACGGTAAAGCTTTGGGATTTATCGAACAACCAACCATCTGTTGTGGCATCTAAAAACTCCAATGCTGGAGCTGTATTTTCTATTTCGTTCTCAGAGGACAACCCCTTTGTGTTGGCTATAGGAGGCTCAGAGGGAAAATTGCAAGTTTGGGACACTTTATCTGAGTCTGCTGTCTCTCGGCGTTATGAAAATTACAACAAGAATAGAACTCGGTCGTGA 1296 0.4367 MDDADGAVDEVARALNVADALGKADKLDDIALGLKELDMEHYDDEDEGVEVFSSGIGDLYYPSNDLDPYIKDKNDDDDSEELEDMIINPTDSVIVCARTEDDLSLLEVHILEDVGTSEMNMYVHHDIIIPAFPLSTAWLDCLQGREKGNFLAVGSMEPSIEIWDLDVIDAVQPCMVLGGISEKKKGKKKSIKYKDDSHTDSVLGLAWNKAFRNILASASADKRVKIWDVATGKCESTMEHHSDKVQAVAWNHREPKILLSGSFDHTVVLRDGRMPSHPGYKWSVTADVESLAWDPHTEHYFVVSLEDGTVKCFDVRTAKSESTSDLSSTFTLHAHDKAVTSVSYNVSAPNLLATGSMDKTVKLWDLSNNQPSVVASKNSNAGAVFSISFSEDNPFVLAIGGSEGKLQVWDTLSESAVSRRYENYNKNRTRS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00129 431 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 332 370 - -
Arst7g00129 431 SMART WD40_4 231 271 IPR001680 GO:0005515
Arst7g00129 431 SMART WD40_4 186 228 IPR001680 GO:0005515
Arst7g00129 431 SMART WD40_4 125 164 IPR001680 GO:0005515
Arst7g00129 431 SMART WD40_4 275 314 IPR001680 GO:0005515
Arst7g00129 431 SMART WD40_4 370 410 IPR001680 GO:0005515
Arst7g00129 431 SMART WD40_4 325 365 IPR001680 GO:0005515
Arst7g00129 431 Gene3D - 35 277 IPR015943 GO:0005515
Arst7g00129 431 PANTHER PERIODIC TRYPTOPHAN PROTEIN 1 24 425 IPR044285 GO:0006364
Arst7g00129 431 FunFam Transducin/WD40 repeat-like superfamily protein 23 276 - -
Arst7g00129 431 ProSitePatterns Trp-Asp (WD) repeats signature. 215 229 IPR019775 -
Arst7g00129 431 Pfam Anaphase-promoting complex subunit 4 WD40 domain 194 252 IPR024977 -
Arst7g00129 431 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 233 - -
Arst7g00129 431 ProSitePatterns Trp-Asp (WD) repeats signature. 352 366 IPR019775 -
Arst7g00129 431 ProSiteProfiles Trp-Asp (WD) repeats profile. 377 419 IPR001680 GO:0005515
Arst7g00129 431 FunFam Putative WD repeat-containing protein C17D11.16 278 420 - -
Arst7g00129 431 Gene3D - 278 426 IPR015943 GO:0005515
Arst7g00129 431 Pfam WD domain, G-beta repeat 329 365 IPR001680 GO:0005515
Arst7g00129 431 SUPERFAMILY WD40 repeat-like 147 416 IPR036322 GO:0005515
Arst7g00129 431 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 237 IPR001680 GO:0005515
Arst7g00129 431 PRINTS G protein beta WD-40 repeat signature 352 366 IPR020472 -
Arst7g00129 431 PRINTS G protein beta WD-40 repeat signature 215 229 IPR020472 -
Arst7g00129 431 PRINTS G protein beta WD-40 repeat signature 397 411 IPR020472 -
Arst7g00129 431 ProSiteProfiles Trp-Asp (WD) repeats profile. 332 374 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00129 Arst-Chr7 903861 908920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00129 212 410 U-box Gene Family AT2G33340 30.769 2.89e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00129 K14791 - gmx:100807947 657.521