Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00126 ATGATTTCAGCTATTTCGTGGATACCGATAGGTGCTTCGAAGGCGGAACCCACCGTAGTTGAACCTCCTTCCAAGGAAGAAATTCAAGATATAATCACCGCCGCCGCCGCCGCCAGTGGAGAAGACAGTGAAAATGAGGAAGAAGCAAGTGATGAACGCATGGATGATGCCGATGGCGCCGTCGATGAAGTTGCGCGAGCACTCAATGTTGCTGATGCTCTCGGGAAGGCTGATAAATTGGACGATATTGCCCTCGGTTTGAAGGAGCTTGACATGGAACATTACGATGATGAAGATGAAGGAGTTGAGGTATTTAGTTCCGGGATTGGTGATCTTTATTATCCAAGTAACGACCTGGATCCTTATATTAAAGATAAGAACGATGATGATGACTCCGAGGAACTCGAAGACATGATCATTAATCCAACTGATTCTGTCATTGTTTGTGCTCGTACTGAGGACGATCTCAGTCTTCTCGAGGTTCATATACTTGAGGATGTCGGTACTAGTGAGATGAACATGTATGTCCATCATGATATCATAATTCCTGCATTTCCACTATCCACAGCTTGGCTTGACTGCCTTCAAGGAAGAGAGAAAGGAAACTTCTTAGCTGTTGGTTCAATGGAACCGTCAATAGAAATTTGGGACCTTGATGTTATTGATGCAGTGCAGCCATGCATGGTTTTAGGTGGCATTTCAGAGAAAAAGAAGGGGAAGAAGAAATCAATCAAATATAAAGATGACAGTCACACTGACTCTGTACTTGGTCTTGCCTGGAACAAAGCGTTCAGGAATATACTTGCTAGTGCCAGTGCTGACAAGCGAGTCAAGATTTGGGATGTGGCTACTGGGAAGTGTGAGAGTACAATGGAGCATCACTCAGACAAGGTTCAAGCAGTTGCCTGGAATCATCGTGAACCAAAAATTCTTCTTAGTGGTTCATTTGATCATACTGTGGTCCTGAGGGATGGAAGGATGCCATCTCATCCTGGTTATAAGTGGTCAGTCACAGCTGATGTCGAGAGCTTGGCCTGGGATCCACACACTGAGCACTATTTTGTGGTGAGTCTCGAGGATGGTACTGTCAAGTGTTTTGATGTTCGGACCGCAAAGTCTGAATCCACATCTGATCTAAGTTCTACATTTACTCTTCATGCACATGACAAAGCTGTTACCTCAGTATCCTATAACGTCTCAGCACCTAATCTACTTGCTACTGGATCGATGGACAAAACGGTAAAGCTTTGGGATTTATCGAACAACCAACCATCTGTTGTGGCATCTAAAAACTCCAATGCTGGAGCTGTATTTTCTATTTCGTTCTCAGAGGACAACCCCTTTGTGTTGGCTATAGGAGGCTCAGAGGGAAAATTGCAAGTTTGGGACACTTTATCTGAGTCTGCTGTCTCTCGGCGTTATGAAAATTACAACAAGAATAGAACTCGGTCGTGA 1455 0.4433 MISAISWIPIGASKAEPTVVEPPSKEEIQDIITAAAAASGEDSENEEEASDERMDDADGAVDEVARALNVADALGKADKLDDIALGLKELDMEHYDDEDEGVEVFSSGIGDLYYPSNDLDPYIKDKNDDDDSEELEDMIINPTDSVIVCARTEDDLSLLEVHILEDVGTSEMNMYVHHDIIIPAFPLSTAWLDCLQGREKGNFLAVGSMEPSIEIWDLDVIDAVQPCMVLGGISEKKKGKKKSIKYKDDSHTDSVLGLAWNKAFRNILASASADKRVKIWDVATGKCESTMEHHSDKVQAVAWNHREPKILLSGSFDHTVVLRDGRMPSHPGYKWSVTADVESLAWDPHTEHYFVVSLEDGTVKCFDVRTAKSESTSDLSSTFTLHAHDKAVTSVSYNVSAPNLLATGSMDKTVKLWDLSNNQPSVVASKNSNAGAVFSISFSEDNPFVLAIGGSEGKLQVWDTLSESAVSRRYENYNKNRTRS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00126 484 ProSitePatterns Trp-Asp (WD) repeats signature. 268 282 IPR019775 -
Arst7g00126 484 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 290 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 378 418 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 284 324 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 423 463 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 328 367 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 239 281 IPR001680 GO:0005515
Arst7g00126 484 SMART WD40_4 178 217 IPR001680 GO:0005515
Arst7g00126 484 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 248 286 - -
Arst7g00126 484 ProSiteProfiles Trp-Asp (WD) repeats profile. 385 427 IPR001680 GO:0005515
Arst7g00126 484 Gene3D - 88 329 IPR015943 GO:0005515
Arst7g00126 484 PANTHER PERIODIC TRYPTOPHAN PROTEIN 1 1 478 IPR044285 GO:0006364
Arst7g00126 484 ProSitePatterns Trp-Asp (WD) repeats signature. 405 419 IPR019775 -
Arst7g00126 484 SUPERFAMILY WD40 repeat-like 200 469 IPR036322 GO:0005515
Arst7g00126 484 Pfam Anaphase-promoting complex subunit 4 WD40 domain 247 305 IPR024977 -
Arst7g00126 484 FunFam Putative WD repeat-containing protein C17D11.16 331 473 - -
Arst7g00126 484 Gene3D - 330 480 IPR015943 GO:0005515
Arst7g00126 484 FunFam Transducin/WD40 repeat-like superfamily protein 76 329 - -
Arst7g00126 484 MobiDBLite consensus disorder prediction 36 58 - -
Arst7g00126 484 PRINTS G protein beta WD-40 repeat signature 268 282 IPR020472 -
Arst7g00126 484 PRINTS G protein beta WD-40 repeat signature 450 464 IPR020472 -
Arst7g00126 484 PRINTS G protein beta WD-40 repeat signature 405 419 IPR020472 -
Arst7g00126 484 Pfam WD domain, G-beta repeat 382 418 IPR001680 GO:0005515
Arst7g00126 484 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 385 423 - -
Arst7g00126 484 ProSiteProfiles Trp-Asp (WD) repeats profile. 430 472 IPR001680 GO:0005515
Arst7g00126 484 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00126 Arst-Chr7 903861 908921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00126 265 463 U-box Gene Family AT2G33340 30.769 2.26e-10 60.8