Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00091 ATGGCCCACTCCAAGGCACTTCCGTGCGACTCCGACGGTGCCTGCTGCCCCTGTTCAAGCATCGGCTCCCGCCGTTGCCGGAAACTCCGACAGCTTAGTGGCGGCGATCCGGGCGATTCAGGGAGACACCTCACTCACTGACGAGGAGAAGGCAAAGAAGAGACAGGAGCTCGTTTCTCGCTCCTCGAAGCCACTCGCAGCAGCGGAGAATGGCAAAGCAGAGAAGGACATCTTCGATGGGAGTCTGAACTGCTCAATCTGCATGCAGTTGCCGGAGAGACCCGTCACGACGCCGTGTGGTCACAACTTTTGTTTGAAGTGCTTCCAGAAGTGGATTGGGCAGGCAAAGCGGACCTGTGCGAACTGTCGCAGTCAGATCCCACCTAAGATGGCCGAAAACCCTCGGATTAATGACCAGCTGGCCATTGCGATCCGTTTGGCGAGGCAAATGAAGGCCACGGGGATGGTGGGTGCGGTAGCGCAGCCCAAGGTGTATGTTTCTCGAAAAAACGACGAGCTTCCAGACACTTGCTTCACCACTGAGCGGGCGAAGAAGACTGGCAAGGCCAACGCGTGCAGTGGTAAGATTTTTGTGACGATCCCTTCGGATTTTTTGGGTCCAATCACTGCTGAGTATGATCCCAGGAACAATCGTGGGGTTCTTGTTGGGGATACTTGGGAAGACAGAATGGATTGCAGGCAGTGGGGCGCCCATTTCCCTCATGTTGCGGGCATTGCTGGTCAAAAGGGTTTTGGTGCTCAGTCTGTAGCTCTTTCAGGTGGCTATGTTGATGACGAGGATCATGGAGAGTGGTTCCTCTACACTGGAAGTGGTGGAAAGGACCTTAGTGGCAACAAACGCACTAACAAAACACATTCATTTGACCAGAAGTTTGACAACATGAATGAGGCCCTCAGAGTGAGTTGCCAACAAGGTTATCCTGTTAGGGTTGTGAGGTCCCACAAGGAAAAACGATCTGCTTATGCACCCCAATTCGGAGTGAGGTATGATGGAGTTTATCGAATAGAGAAATGCTGGCGTAAGAAGGGAATACAAGGTTGCTTGGTTTGCAGATATTTGTTTGTTAGATGTGACAATGAACCAGCTCCATGGACAAGTGATGAACATGGAGACCGTCCACGCCCACTTCCAGTGGTTAAAGAGTTGAAGGGGGCAATTGATGTAACTGAAAGGAAGAAAGCTGCAGCATGGGATTATGATGAGGAAAAGGAATGCTGGATGTGGAAGAGACCCCCACCACCAAGCAAGAAAATGGATGCTATAAGGTGTGAAAATGGGATATCAGAAAAGATAAAAATTGTACGAAAAGTCAAGACCAAGCCAGTGAGAGATAGGCTTATGAAAGAGTTTGCTTGCCTCTTGTGTCGCAAGGTGTTGAGCGTCCCTGTGACAACTCCTTGTGGCCACAACTTCTGCAAATCCTGTTTGGAGGGTGCCTTTTCTGGCAAAAGTTTTATCAGAAAGAGGGGAAGCGAAGGTGGGCGCACCTTGCGAGCACAGAAGAATGTTATGAAATGCCCTTCATGTTCAATTGACATAGCTGAATTTCTTCAGAACCCAGAGGTTAACAGACACATGATGAGTGCGATAGAAGCCCTCCTCCGCGAGGCTGAGATGGAAGAGAGTTCTGAAGTGTCCAATGACAAAAATGATGAAAATATAGAGACTGTGAATGATGATGATGGTACAGAAGTTTCAAAGCCTTGTGATTCAGGTGAGAATGTCCTAGAGGAGATCAAGGACAATGATTTGAATCAGCCACACAAGCGCAGAAAGGGTGCTGGTGATTCAGCTATTGTGAACACTGAGGAGCAAATCAATGTGGCAGGACTAGAGGACAATGTAATGACTTGCAGCACTTAA 1885 0.4928 MAHSKALPCDSDGACMLCKQKPPPHECLTCRTCHTPWHQPCLPAGTGPPTMAEVSTWECPDCADPAPVQASAPAVAGNSDSLVAAIRAIQGDTSLTDEEKAKKRQELVSRSSKPLAAAENGKAEKDIFDGSLNCSICMQLPERPVTTPCGHNFCLKCFQKWIGQAKRTCANCRSQIPPKMAENPRINDQLAIAIRLARQMKATGMVGAVAQPKVYVSRKNDELPDTCFTTERAKKTGKANACSGKIFVTIPSDFLGPITAEYDPRNNRGVLVGDTWEDRMDCRQWGAHFPHVAGIAGQKGFGAQSVALSGGYVDDEDHGEWFLYTGSGGKDLSGNKRTNKTHSFDQKFDNMNEALRVSCQQGYPVRVVRSHKEKRSAYAPQFGVRYDGVYRIEKCWRKKGIQGCLVCRYLFVRCDNEPAPWTSDEHGDRPRPLPVVKELKGAIDVTERKKAAAWDYDEEKECWMWKRPPPPSKKMDAIRCENGISEKIKIVRKVKTKPVRDRLMKEFACLLCRKVLSVPVTTPCGHNFCKSCLEGAFSGKSFIRKRGSEGGRTLRAQKNVMKCPSCSIDIAEFLQNPEVNRHMMSAIEALLREAEMEESSEVSNDKNDENIETVNDDDGTEVSKPCDSGENVLEEIKDNDLNQPHKRRKGAGDSAIVNTEEQINVAGLEDNVMTCST 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00091 677 SMART ring_2 15 62 IPR001841 -
Arst7g00091 677 SMART ring_2 134 172 IPR001841 -
Arst7g00091 677 SMART ring_2 509 566 IPR001841 -
Arst7g00091 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 495 617 IPR013083 -
Arst7g00091 677 ProSiteProfiles Zinc finger RING-type profile. 509 567 IPR001841 -
Arst7g00091 677 CDD RING-HC_ORTHRUS_rpt1 131 177 IPR047498 -
Arst7g00091 677 ProSiteProfiles Zinc finger RING-type profile. 134 173 IPR001841 -
Arst7g00091 677 Pfam SAD/SRA domain 267 416 IPR003105 -
Arst7g00091 677 SMART G9a_1 260 417 IPR003105 -
Arst7g00091 677 MobiDBLite consensus disorder prediction 597 629 - -
Arst7g00091 677 ProSitePatterns Zinc finger RING-type signature. 524 533 IPR017907 -
Arst7g00091 677 ProSitePatterns Zinc finger PHD-type signature. 15 62 IPR019786 -
Arst7g00091 677 MobiDBLite consensus disorder prediction 635 654 - -
Arst7g00091 677 SUPERFAMILY RING/U-box 128 181 - -
Arst7g00091 677 SUPERFAMILY RING/U-box 502 593 - -
Arst7g00091 677 SUPERFAMILY PUA domain-like 239 433 IPR015947 -
Arst7g00091 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 81 IPR013083 -
Arst7g00091 677 ProSiteProfiles YDG domain profile. 265 413 IPR003105 -
Arst7g00091 677 SUPERFAMILY FYVE/PHD zinc finger 7 65 IPR011011 -
Arst7g00091 677 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 199 IPR013083 -
Arst7g00091 677 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 6 604 IPR045134 -
Arst7g00091 677 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 236 431 - -
Arst7g00091 677 Gene3D - 236 435 IPR036987 -
Arst7g00091 677 Pfam RING-type zinc-finger 509 564 IPR027370 -
Arst7g00091 677 SMART PHD_3 14 63 IPR001965 -
Arst7g00091 677 Pfam Zinc finger, C3HC4 type (RING finger) 132 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00091 Arst-Chr7 547141 550929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00091 1 600 C2H2 Transcription Factor Family AT5G39550 59.046 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00091 K10638 - gmx:100786796 938.332