Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00087 ATGGTATACCCGGTCAACCATCTTGCTCCTCGTGCACGGCAGTCACTACTCACTCACCAACCAAATAATGTTTCTCTATTTAAACATTTCATCCCTAGGCTGAATTGTTTAGGAAGGAAGATGGCTGGCAAGCAAATTGTTTCCTCTGACCCCCTGAGCTGGGGCCTAGCAGCGAATTCACTCAAGGGCAGCCACTTTCATGAGGTCAAACGCATGGTGGCCGAGTACCGGAAGTCCGCCCTTTGCATGGGAGCGGGGGAGCCCCTAACCGTGTCGCAGGTGGCTGCCGTTGCCAAGCGTGAGTCTCAAGTCAAGGTGGAGCTCGCTGAGTCTGCGAGGGCAGGCGTCGAGGCCAGCTGCCAGTGGATCATGGACAGCGTTGAAAAAGGCATTACCATCTATGGTGTTACCACTGGCTTTGGCGCTGCCTCCAACAGAAAAACCGATCAGGGACTTGCCCTTCAGAGAGAGATGGTTAGGTTTTTGAATTGTGCAATATTTGGCCATGAGAGTGAGTTATCCCATACCCTGCCAAAATCAGCAGCGAGAGCAGCAATGCTTGTGAGGGTCAACACCCTTCTTCAGGGGTACTCTGGCATCAGATTTGAAATCTTAGAAGCTATCACCAAACTCCTCAACAACAATGTCACCCCCGTATTGCCATTACGCGGTACCATTACTGCTTCTGGCGATCTGATTCCTCTCTCCTACATTGCTGCATTGCTAACTGGCCGGCAAAACTCCAAAGCCCTCGGACCCTCTGGAGAGTCCCTTGATGCAAAGGAAGCTTTCCATTTAGCAGGTCTGCATTCTGGGTTCTTTGAGCTGAAACCCAAAGAAGGACTTGCCCTCGTAAATGGCACTGCCGTGGGGTCTAGTGTAGCTTCTGTGGTGCTCTTTGAGGCAAACATCTTAGCTTTATTGTCTGAAATTTTGTCAGCAGTTTTCACCGAAGTTATGCAGGGGAATCCAGAATTTACACATCATTTGATACATAAGCTGAAGTACCATCCTGGCCAAATTGAAGCTGCTGCTATTATGGAGCACATCTTAGAGGGTAGCTCTTACATCAAACAAGCCAGAATGCGACAGCCAGATCCATTGCAGAAACCTAAAAAAGATCGTTATGCTCTCCAAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAGTCATCAGGTATTCGACTAAATCAATTGAGAGGGAAATAAACTCTGTCAACGACAATCCTTTGATTGATGTCACTAGTAGCAAAGCTTTGAATGGTGGCAATTTTCAAGGCACCCCAATTGGAGTTTCGATGGATAATGCACGCTTAGCTGTTGCTTCCATTGGCAAACTCATCTTTGCCCAATTTACCGAGCTAGTCAATGACTCGTATAACAACGGTTTGCCATCGAATCTCTCTGTCGGCAGAAATCCGAGTCTGGATTATGGTTTTAAGGCATCTGAGGTTGCCATGGCTGCTTATTGCTCTGAACTTCAATATCTGGCAAACCCAGTAACCAACCACGTGCAAAGTGCTGAGCAACATAACCAAGATGTGAATTCCTTGGGGTTAATTTCTGCTTGGAAAACCGTAGAAGCTGTGGAGATATTGAAGCTAATGTGCTCCACGTATTTGGTTGCGCTTTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTGAAGAGCACAATCAAGGATACTATAAGCGGAGTTGCAAAGAAGACATTAAGCACGGATTTGTTTGGATCATGTGAGAGAGATTTGCTCAAAGTAGTTGATAGAGAATATGTATTCTCCTATATTGATGATCCCTTCAATGTTAGATATCCATTGATGCCAAAATTGAAACAAATACTTTATGAGGAAGCACAGGCGAGTGCCATCAGCGGGAAGAAAAATGCGAGCGTAGTTTTTGAGGAAATTGGAGCTTTTGAGAATGAGTTGAAGAGTATGTTACCAAATGAGGTTGAAAGTGCAAGGGTGGCTTATGAGAATGGGAATCCAACAGTTCCAAATAGAATTGCAAAATGCAGATCATACCTTTTGTATAAGTTTGTGAGGGAAGAGCTCGGAATAGGGTTGCTCACCGGCGAGAAGACTGCCTCACCAGACAAAGAATTCGAGAAAGTATTTACAGCAATTTGTCAAGGAAAGATTTTTGACTCCATTCTAGACTGTCTCAAAGAATGGAACGGGGTTCCCGTTTCAGTTTTCTAG 2208 0.4561 MVYPVNHLAPRARQSLLTHQPNNVSLFKHFIPRLNCLGRKMAGKQIVSSDPLSWGLAANSLKGSHFHEVKRMVAEYRKSALCMGAGEPLTVSQVAAVAKRESQVKVELAESARAGVEASCQWIMDSVEKGITIYGVTTGFGAASNRKTDQGLALQREMVRFLNCAIFGHESELSHTLPKSAARAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNVTPVLPLRGTITASGDLIPLSYIAALLTGRQNSKALGPSGESLDAKEAFHLAGLHSGFFELKPKEGLALVNGTAVGSSVASVVLFEANILALLSEILSAVFTEVMQGNPEFTHHLIHKLKYHPGQIEAAAIMEHILEGSSYIKQARMRQPDPLQKPKKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTSSKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDSYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISAWKTVEAVEILKLMCSTYLVALCQAIDLRHLEEILKSTIKDTISGVAKKTLSTDLFGSCERDLLKVVDREYVFSYIDDPFNVRYPLMPKLKQILYEEAQASAISGKKNASVVFEEIGAFENELKSMLPNEVESARVAYENGNPTVPNRIAKCRSYLLYKFVREELGIGLLTGEKTASPDKEFEKVFTAICQGKIFDSILDCLKEWNGVPVSVF 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00087 735 Pfam Aromatic amino acid lyase 89 553 IPR001106 -
Arst7g00087 735 SUPERFAMILY L-aspartase-like 50 733 IPR008948 GO:0003824
Arst7g00087 735 Gene3D - 554 669 IPR023144 -
Arst7g00087 735 NCBIfam phenylalanine ammonia-lyase 50 725 IPR005922 GO:0005737|GO:0006559|GO:0016841
Arst7g00087 735 FunFam Phenylalanine ammonia-lyase 41 288 - -
Arst7g00087 735 PANTHER HISTIDINE AMMONIA-LYASE 47 734 IPR001106 -
Arst7g00087 735 PANTHER HISTIDINE AMMONIA-LYASE 47 734 IPR001106 -
Arst7g00087 735 CDD PAL-HAL 87 551 IPR001106 -
Arst7g00087 735 Gene3D - 41 288 IPR024083 -
Arst7g00087 735 Gene3D Fumarase/aspartase (Central domain) 289 729 - -
Arst7g00087 735 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 224 240 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00087 Arst-Chr7 531336 534078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00087 46 734 Monolignol Biosynthesis Gene Families AT2G37040 69.397 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00087 K10775 - gmx:100787872 1107.05