Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00082 ATGGAGAACGAGATGCAACAGCTGCTTAGCATGGGCTTCCCCAACGAGCTAGCCGCCCAAGCCTTGGCTGCCACCGGCGGCAGATCCACTGTCAAAGCCACCGAATGGATCCTAACTCACAAATCGAACCCTTCAGCTTCCCCACCGCCGGCGCCCACGCAACCTAAGATCGAACGGTTTTTCCACTCGCACTCGAAGCAAGAAGGGCAAGCAATTGATGTTGAGCAACAGCAACACGACGAGGCATCCCCACTCTCAAAACGCCAAAGAACACTACCCTCCTCAAATCCCAATCCCAATCCTAATCCTAATCCTCAATCTTCCTTCTTCTTCAACCCTCTTCGCCCTTCCAAGAAGAACGCCCACGAGCCCCTATACGAGCGCCTCCGCCCCAGAACCCTCGACGACGTCCTTGGTCAAGACCATCTCCTCTCCCCCACTTCCCTCCTTCGCTCCGCCATCCACCGCAACCGTCTCCCTTCCATCCTCCTCTGGGGTCCCCCCGGCACCGGCAAGACCACCATCGCCAGAGCAATCGTCAACTCCTTTCCCCATCAACAATGCCCTTGTTATCGCTTTGTCTCCTTATCCGCTGTCACCAGCGGCGTCAAAGATGTCCGGGACGCCGTGGACGAGGCCAGAAAGCTGAGAGTGAAGAGCAACCAGAGAACCGTTCTGTTCGTGGATGAGGTTCACAGATTTAACAAGTCCCAGCAGGACTCTTTCTTGCCCGTCATTGAAGATGGCAGCATTGTCTTCGTCGGAGCCACCACCGAGAACCCTTCGTTCCACTTGATCACCCCTCTCTTGTCTCGCTGCAGGGTCCTTACCCTTAACCCTCTCAAGCCCCACCATGTTGCCTTGCTTCTCAGAAGGGCTGTCAATGACTCCGACAAAGGGTTGACTCACAGCGCTGGTTGTCAGGTTGATGTGAGCCAGGATGTTCTGGATTTCATAGGAAACAACTGTGATGGGGATGCTCGTGTCGCCCTGAATGCTCTCGAGATAGCTGCTGTTACTGCTGCTGCAAGGCTCCAACAACCTGCTAACCAATCCAAAGAGGAGCAACAGAAGGCTGCTGCTGCTGTTGCTGTTACACTCGATGACGCAAAGGAGGCACTTCAGTGCAAGCATCTTGCTTATGATAAAGCTGGGGAAGAGCACTATAATCTGATCAGCGCACTCCACAAATCCATGAGGGGGAGTGATGCCAATGCAGGGATTTATTGGTTGGCAAGAATGTTGGAAGGAGGGGAAGAGCCTCTCTACATTGCGCGCAGGCTCATAAGGTTTGCAAGTGAGGATGTTGGTTTGGCTGATCCCTCAGCTCTCAATCAGGCTGTTTCTTGCTATCAGGCCTGCCACTTCCTGGGAATGCCAGAATGCAATGTCATTCTTGCGCAGTGTGTCGCCTACTTGGCATTGGCTCCTAAATCTGTCTCTGTTTACAAAGCAATAGGTGCTGCTCAGAAGGTGGTGAGGGAATCTGTTGGGCAGAATGAAGGGGTGCCCCTTCATCTCAGGAATGCTCCAACCAAACTAATGAAGGACATTGGATATGGCAAGGGATACATATACCCTCCAGACAACCCTTCAGCAACACAGAGCTATTTGCCGCCCTCACTCGCAGGCTACAAGTTCCTTGATTGGCCTACCAGGACTGCTTCTCCTGATGAAGCAAATCCTCCATCCACATCTGGGTCTGGCAGTATATAG 1716 0.5315 MENEMQQLLSMGFPNELAAQALAATGGRSTVKATEWILTHKSNPSASPPPAPTQPKIERFFHSHSKQEGQAIDVEQQQHDEASPLSKRQRTLPSSNPNPNPNPNPQSSFFFNPLRPSKKNAHEPLYERLRPRTLDDVLGQDHLLSPTSLLRSAIHRNRLPSILLWGPPGTGKTTIARAIVNSFPHQQCPCYRFVSLSAVTSGVKDVRDAVDEARKLRVKSNQRTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLKPHHVALLLRRAVNDSDKGLTHSAGCQVDVSQDVLDFIGNNCDGDARVALNALEIAAVTAAARLQQPANQSKEEQQKAAAAVAVTLDDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDANAGIYWLARMLEGGEEPLYIARRLIRFASEDVGLADPSALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSVSVYKAIGAAQKVVRESVGQNEGVPLHLRNAPTKLMKDIGYGKGYIYPPDNPSATQSYLPPSLAGYKFLDWPTRTASPDEANPPSTSGSGSI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00082 571 FunFam Replication-associated recombination protein A 117 280 - -
Arst7g00082 571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 348 IPR027417 -
Arst7g00082 571 SUPERFAMILY post-AAA+ oligomerization domain-like 385 551 IPR008921 GO:0003677|GO:0006260
Arst7g00082 571 CDD HLD_clamp_RarA 281 375 - -
Arst7g00082 571 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 40 IPR015940 -
Arst7g00082 571 Gene3D - 115 279 IPR027417 -
Arst7g00082 571 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 5 556 - -
Arst7g00082 571 FunFam Putative AAA family ATPase 375 478 - -
Arst7g00082 571 Pfam AAA C-terminal domain 308 400 IPR032423 -
Arst7g00082 571 Pfam UBA/TS-N domain 5 37 IPR015940 -
Arst7g00082 571 CDD AAA 139 274 - -
Arst7g00082 571 Gene3D - 1 53 - -
Arst7g00082 571 SUPERFAMILY UBA-like 3 51 IPR009060 GO:0005515
Arst7g00082 571 Gene3D - 281 355 - -
Arst7g00082 571 SMART AAA_5 158 281 IPR003593 GO:0016887
Arst7g00082 571 MobiDBLite consensus disorder prediction 76 115 - -
Arst7g00082 571 Gene3D - 375 478 - -
Arst7g00082 571 Gene3D - 479 557 - -
Arst7g00082 571 Pfam ATPase family associated with various cellular activities (AAA) 162 275 IPR003959 GO:0005524|GO:0016887
Arst7g00082 571 Pfam MgsA AAA+ ATPase C terminal 401 548 IPR021886 -
Arst7g00082 571 FunFam AAA-type ATPase family protein 281 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00082 Arst-Chr7 516763 518799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00082 124 401 Core DNA Replication Machinery Family AT1G77470 24.648 1.34e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00082 K07478 - gmx:100799257 809.29