Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00066 ATGGAATATGGTGGCATAGTGCACAATGAAAATGGTGCGTTTGGGAGCTTGTCGGAGTCAGCGGTAGAGGCAGAAGTAGATTTGGTGGACGAGCTACTGGTGGAGGGGTGCTGGGTGGAGACAACTAGTGCAGGAGGGTGCTACAACTGGATGCATAATCCATCAGATGCAGTAGTGGCGCCGCAACCACAGTACTTGGAAATGCTGCAGCTGCAGCTGCAGGAGGAATCATCATCGTCGTCATCAGATCAGGAGAGCCTTGTGGGCAAGAGGTGGTGGATCGGGCCTACTAGGCCGGGCCCTTCATCATCTTCTTCTTCTTCCTCCTCGGTAAAGGAGAGATTAGTGGTCGCGGTCGGGTACTTGAAAGACTACACAAAGAACAACAATCTGCTCATTCAGATATGGGTGCCCCCACGGAGATCACCACTACCCCTTCCCCTTCCCCTTCCCCTTGATGTGCTCACCTTTCCCAACCCCAGCCCTAACCCTAACCCTAACCTATGCGTTCGCTTCTTGAGAAGCCATGAGTATTCTCATCATTATCAGGCGCAGCAGCACTACGATCTCCGTGGATCCATCGCCTTACCCGTCTTTGAACGAGGCACTGCCACGTGCCTTGGCGTCCTCGACATTCTCATCACCAACCACCTCAACCTCACCAACAACTATCGCCCTCAGCTTGATAATGTCTGCAACGCTCTCGAGGCTGTCGATTTTAGGAGCTCTCATCAGAACTTGAACGCGAATTTTATGCCGCCGGCCATAAAGGTGTATGAGGAGCTATACCAAGCAGCACTGAATGAGATAGTGGAGGTGTTGACATCGGTGTGCAAGACGCAGAATCTTCCTCTAGGGCTGACATGGGCGCCGTGCATCCAACAAGGAAAGTGTGGGTGCGGGCACTCATCGGCAATGTGCGTGTCCACGGTGGATACAGCGTGCTATGTGGGGGATCTGGAAATGCTGGGCTTCCAGGAGGCGTGCTCAGAGTACCACCTCTTCAAGGGGCAAGGCATAGTTGGCACCGCCTTCACATCAGCCAAGCCCTGTTTCGCAATCGACATAACAGCCTTCAGCAGAGCAGAATACCCGCTTTCTCACCTCGCTAACATCTTTGGCTTGCATGCCGCCGTCGCCATCCCCCTCCGCAGCCTCTACACCGGATCCGCTGACTTCGTCTTGGAGTTCTTCCTGCCAAAGGACTGCCATGACACCGAGCAGCAGAAGCACATGCTCAATTCCCTCTCCATGCTCGTCCAGCAAGCTTGCCGGAGCTTGCACGTTGCCACCGAAGACGACTTCACCCCTCCGATGCTCACTCATCATCAAGCGCAAGCACAAATAATGGAAGAGGCGTGCTCGAAGGATCAGTCGTGGATAGCGCACATGATGGAGGCGCAGGTGCAGCAGAAGGGGAAAGGGGTGTGCGTGTCGTTGGAGTACCAAATGGAAGAGCCCAAAGAGGAGTTCAAGGTGACAACCAACTGGGACACCGCCAACGACCAAGCCCATCACCAGCTGTTCTCCTCATCAGATTTCGGCCACATTGACGTGCTTGAGCACAGTAGGTCGAGGGCCAGCACTGCCGTGGACGGCGGCGAGGAGTCTTACGCCTTGGGTGGGCGGCGCTCCTCTTCTTCGGGTTCGGGCGGCAGGAAGTCAGGCGACAAGAGGCGAACCAAGGCTGAGAAGACTATCAGCCTGCCTGTCCTCAGACAGTATTTCGCCGGAAGCCTCAAAGACGCTGCCAAGAGCATTGGAGTGTGTCCCACGACTCTGAAAAGGATATGCAGGCAGCATGGGATAACAAGGTGGCCTTCCAGGAAAATAAAGAAGGTAGGGCACTCTTTGAAGAAACTTCAGCTTGTGATCGATTCGGTGCAGGGTGCAGAGGGTGCCATACAGATTGGCTCCTTCTATGCCAGCTTTCCCGAGTTAAGCTCCACAGATCTCTCTTCCCGTTCCGAATCATCACCATCCAAGAAAACCCACAGTACAACTATTCCTCATCAGAATCACAATAACAATACATTCTTGAAATCCCCACCCTCCTCTGCATGCAGCCAGACCTTAGATGTTGTCATGACAGAGAGCTCCGAGGCAGCATTGCTGCTCAAGAGAGCTCACAGCGAGGCGGCAGAGTTGCTGCAGCATGCATCCCTCCAATCACAAGAGGATACAAAGCATAATAGTTTCATCAGCAGCAGATCCAATAATAAGAGCCATCATCATCACTCTCAAGACAGAGACAAAGAAAGGGGTGCTTTCAGGGTACTTGAGATGGCAAGGCGCTTCAACTTGAACGATATTAGCATCAGCAGCAGCAACATTGATCTCAAATACTTGGATGAAGATGGGGAGTGGGTTTTGTTGGCATGCGATGCAGATCTTGAGGAGTGCAAGGACATACACAGATCATCTCAGAGCCGAACCATCCGCCTCTCACTTTTTCAAGCTTCCCCCCTCAATCATCTAGCAACAAACACTTTTGGCAATGGCACCACCAGCCCCTCCTAG 2520 0.5306 MEYGGIVHNENGAFGSLSESAVEAEVDLVDELLVEGCWVETTSAGGCYNWMHNPSDAVVAPQPQYLEMLQLQLQEESSSSSSDQESLVGKRWWIGPTRPGPSSSSSSSSSVKERLVVAVGYLKDYTKNNNLLIQIWVPPRRSPLPLPLPLPLDVLTFPNPSPNPNPNLCVRFLRSHEYSHHYQAQQHYDLRGSIALPVFERGTATCLGVLDILITNHLNLTNNYRPQLDNVCNALEAVDFRSSHQNLNANFMPPAIKVYEELYQAALNEIVEVLTSVCKTQNLPLGLTWAPCIQQGKCGCGHSSAMCVSTVDTACYVGDLEMLGFQEACSEYHLFKGQGIVGTAFTSAKPCFAIDITAFSRAEYPLSHLANIFGLHAAVAIPLRSLYTGSADFVLEFFLPKDCHDTEQQKHMLNSLSMLVQQACRSLHVATEDDFTPPMLTHHQAQAQIMEEACSKDQSWIAHMMEAQVQQKGKGVCVSLEYQMEEPKEEFKVTTNWDTANDQAHHQLFSSSDFGHIDVLEHSRSRASTAVDGGEESYALGGRRSSSSGSGGRKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYASFPELSSTDLSSRSESSPSKKTHSTTIPHQNHNNNTFLKSPPSSACSQTLDVVMTESSEAALLLKRAHSEAAELLQHASLQSQEDTKHNSFISSRSNNKSHHHHSQDRDKERGAFRVXLEMARRFNLNDISISSSNIDLKYLDEDGEWVLLACDADLEECKDIHRSSQSRTIRLSLFQASPLNHLATNTFGNGTTSPS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00066 840 Gene3D - 758 819 - -
Arst7g00066 840 MobiDBLite consensus disorder prediction 528 564 - -
Arst7g00066 840 Pfam RWP-RK domain 567 614 IPR003035 -
Arst7g00066 840 ProSiteProfiles RWP-RK domain profile. 553 634 IPR003035 -
Arst7g00066 840 ProSiteProfiles PB1 domain profile. 731 821 IPR000270 GO:0005515
Arst7g00066 840 MobiDBLite consensus disorder prediction 651 684 - -
Arst7g00066 840 PANTHER PROTEIN NLP8 159 825 IPR045012 GO:0003700
Arst7g00066 840 MobiDBLite consensus disorder prediction 727 755 - -
Arst7g00066 840 Pfam PB1 domain 762 820 IPR000270 GO:0005515
Arst7g00066 840 SUPERFAMILY CAD & PB1 domains 758 823 - -
Arst7g00066 840 SMART PB1_new 737 821 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00066 Arst-Chr7 365476 368972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00066 11 840 NLP Transcription Factor Family AT4G35270 40.647 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst7g00066 PB1 1.3e-10 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00066 - - aip:107633985 1514.21