Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00056 ATGAATAATCATCTGCCACAATGCCATGCATTAACAACATTAATACTGCTTCTATTATTGCATGGAGACGGAGCATCCAGCAGTGAGAGTGAAGTCGTCAAAATCGGTGCCATCTTCACATTAAAAACTATAAACGGGAGAGTTTCCAAAATTGCGATCCAAGCTGCTGAGAGGGACGTCAATGCAGATCCTCGCATCCTGGGGGGACGTAAATTGTCTATCACCGTCCATGACTCCAACTTCAGTGGCTTTCTTAGCTTCATTGGGGCCCTCAAGTTGTTGGTGACGGACACTGTAGCAATAATTGGTCCGCAAAGTTCGGTGATGGCCCATGTGCTTTCGCATCTTGCAAATGAGCTCCACGTCCCTCTACTCTCCTTCACGGCTCTTGATCCCACCCTGTCGCCTCTTCAGTACCCTTATTTCGTTCAAACTGCACCCAGCGATCAGTTCCAGATGACTGCGGTGGCAGACATGATTAGCTATTATGGTTGGAGAGAGGTCATTGCGGTGTTCAGCGACGATGATCAGAGTCGAAATGGCATAACTGTGTTGGGGGATAAGCTTGCAGAGAAACGCTGTAAGTTGTCTTATAAAGCAGCACTGCCCCCTGATCCAACGGCCAGCGCAAGCGATGTATCCTCTGAGCTGGCCAAGATTCAAAGTATGGAAGCTCGGGTGGTTGTAGTGCACACCTTTGCCCAAACAGGTCTCTTGGTTTTTGATGTGGCTCACAGACTAGGGATGATGAGGCAAGGCTATGTGTGGATAGCTACTACTTGGCTTTCAACTGTCTTAGATTCAACTTCAAACACCTCCAACTCTCTGGATATCCGGGGAGTTCTCACGCTTCGCCCTCACACCCCTCTGTCAAGACCAAAACAGGCATTCATCTCAAGGTGGAAGCACATTAGTAATGGCTCTGTTGGATTAAACCCATACGGACTCTACGCTTATGATGCTGTTTGGACCATTGCCCACGCATTGAAGCTATTCTTTGCTGAGAATGGGACCATCTCTTTCTCCAATAATACAAATTTTGGTGGTATGGCTGGTCTTGCTTCCTTGAGCATCTTTGATGGTGGGAACCAGTTACTCGATAACATACTTCGCATAAACACCACTGGATTGACAGGGCCGATTCAATTTGTTGGCTCAAACAGATCCCCCCTGCATCCATCCTATGACATCCTTAATGTACATGCCACTGGCTACAGGACTATTGGATACTGGTCCAATTACTCTGGCCTCTCTGTCACCACTCCCGAGAAACTTCACAGAAAGACATCCATCCGCTCTGTTTCAAACCAGCATCTATACAATGTGACGTGGCCTGGAAATACAAGGGAAAGGCCTCGTGGATGGGTTTTCCCCCATAGTGGGAGGCAACTCAGAATCGGGGTCCCCAACAGAGCCAGTTATCAAGGCATCGTCTCACAAATAAATGGGCCCCATGTAGTTCAAGGATACTGCATCGACATATTCCTCGCTGCCATCAAATTGCTTCCATATCCAATTCAATATAGGTTCATTCTGTTTGGAGAAGGACATAAGAATCCAAGCTACTATGATCTTGTCAACATGATTGCTTCGGATGTGTTTGATGCTGCTATAGGTGACATTGCAATTGTCACTGACCGAACAAAGATCGTGGATTTTACTCAACCATATATAGAGTCAGGTCTAGTTGTGGTTGCTCCGGTTCAAAGATTGAAGTCAAGTTCTTGGGCTTTCTTGAGACCATTTACTGCACCCATGTGGGGTGTCACTGCACTTTTTTTCCTTCTTATTGGAGCAGTGATCTGGATTCTTGAACACCGAACCAACGATGAGTTCCGAGGGCCTCCAAAGACGCAAATAGTGACTGTTCTTTGGTTTAGTTTCTCAACTATGTTCTTTGCGCACAGAGAGAACACAGTTAGCCCACTTGGTCGTGTTGTGCTGATAATATGGCTTTTTGTGGTTCTAATAATCAATTCAAGTTACACGGCAAGCTTGACGTCAATTCTAACTGTGCAGCAGCTGTCCTCACCCATAACGGGCATTGACACCTTGATAACAAGCAACAAGCCCATAGGATTCCAGGTAGGGTCATTTGCTGAGAACTATCTCACTCAGGAACTGAACATCCCAAAACATAGGCTTGTTCCCCTTGGCTCGCCAGAAGAATATGCTACTGCCCTTGAGAAGGGAACTGTTGCCGCTGTGGTAGATGAACGCCCATATGTTGAACTCTTCCTGTCAGAACACTGCCATTTCTCAATTAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCGGAGGGACTCTCCTTTAGCCATTGACATGTCAACTGCCATTCTGAGTCTATCCGAGAACGGTGAACTTAGTAAGATCCATGATAAGTGGCTTTCAAAGAAGGCCTGTGGTTTTCGCGGTGCACAGGATGAGCAACTTCAATTCAACAGTTTCCGGGGCCTATTCCTGATCTGCGGGATAGCGTGTTTGGCGGCGCTCCTTATCTACTTGCCCTCGGTGGCATACCAATTCAGTCAGAACTCCCCGGAAAGAGAGAGAGGCAATCATCCTTTTGGTCATTCCAGCACCTCACGTTCTGCACGCATACAGACATTTCTAAGCTTCGTTGATGAAAAGGAAGACACATCACGCAACAACAGCAAGTTTAAAAGGAAACTTGAGGATATCTCATCTTCCAGATCCAGATCCAGAACCAGAATCAGCCGTTTAAGGACCATGGCCATGCCCAAGAAATTACACATACACATAGGCACTTCTCAACAGTCAGGACCAAATGCCGGATACTCAGGTTCCACCGATCAAGCAATCAATTAG 2841 0.4671 MNNHLPQCHALTTLILLLLLHGDGASSSESEVVKIGAIFTLKTINGRVSKIAIQAAERDVNADPRILGGRKLSITVHDSNFSGFLSFIGALKLLVTDTVAIIGPQSSVMAHVLSHLANELHVPLLSFTALDPTLSPLQYPYFVQTAPSDQFQMTAVADMISYYGWREVIAVFSDDDQSRNGITVLGDKLAEKRCKLSYKAALPPDPTASASDVSSELAKIQSMEARVVVVHTFAQTGLLVFDVAHRLGMMRQGYVWIATTWLSTVLDSTSNTSNSLDIRGVLTLRPHTPLSRPKQAFISRWKHISNGSVGLNPYGLYAYDAVWTIAHALKLFFAENGTISFSNNTNFGGMAGLASLSIFDGGNQLLDNILRINTTGLTGPIQFVGSNRSPLHPSYDILNVHATGYRTIGYWSNYSGLSVTTPEKLHRKTSIRSVSNQHLYNVTWPGNTRERPRGWVFPHSGRQLRIGVPNRASYQGIVSQINGPHVVQGYCIDIFLAAIKLLPYPIQYRFILFGEGHKNPSYYDLVNMIASDVFDAAIGDIAIVTDRTKIVDFTQPYIESGLVVVAPVQRLKSSSWAFLRPFTAPMWGVTALFFLLIGAVIWILEHRTNDEFRGPPKTQIVTVLWFSFSTMFFAHRENTVSPLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDTLITSNKPIGFQVGSFAENYLTQELNIPKHRLVPLGSPEEYATALEKGTVAAVVDERPYVELFLSEHCHFSIRGQEFTKSGWGFAFRRDSPLAIDMSTAILSLSENGELSKIHDKWLSKKACGFRGAQDEQLQFNSFRGLFLICGIACLAALLIYLPSVAYQFSQNSPERERGNHPFGHSSTSRSARIQTFLSFVDEKEDTSRNNSKFKRKLEDISSSRSRSRTRISRLRTMAMPKKLHIHIGTSQQSGPNAGYSGSTDQAIN 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00056 946 SUPERFAMILY Periplasmic binding protein-like I 28 456 IPR028082 -
Arst7g00056 946 Gene3D - 576 704 - -
Arst7g00056 946 MobiDBLite consensus disorder prediction 886 912 - -
Arst7g00056 946 SUPERFAMILY Voltage-gated potassium channels 587 671 - -
Arst7g00056 946 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 880 IPR015683 -
Arst7g00056 946 Gene3D - 51 392 - -
Arst7g00056 946 CDD GluR_Plant 462 800 - -
Arst7g00056 946 FunFam Glutamate receptor 459 575 - -
Arst7g00056 946 Pfam Receptor family ligand binding region 51 401 IPR001828 -
Arst7g00056 946 Pfam Bacterial extracellular solute-binding proteins, family 3 487 801 IPR001638 -
Arst7g00056 946 Gene3D - 459 575 - -
Arst7g00056 946 Gene3D - 766 799 - -
Arst7g00056 946 Gene3D - 148 417 - -
Arst7g00056 946 FunFam Glutamate receptor 148 305 - -
Arst7g00056 946 SMART AABind_6 463 803 IPR001638 -
Arst7g00056 946 PIRSF IGluLR_plant 5 924 IPR017103 -
Arst7g00056 946 PIRSF IGluLR_plant 5 924 IPR017103 -
Arst7g00056 946 Pfam Ligand-gated ion channel 802 831 IPR001320 GO:0015276|GO:0016020
Arst7g00056 946 FunFam Glutamate receptor 575 705 - -
Arst7g00056 946 FunFam Glutamate receptor 701 804 - -
Arst7g00056 946 SUPERFAMILY Periplasmic binding protein-like II 442 802 - -
Arst7g00056 946 CDD PBP1_GABAb_receptor_plant 34 419 IPR044440 -
Arst7g00056 946 SMART GluR_14 465 802 IPR001320 GO:0015276|GO:0016020
Arst7g00056 946 MobiDBLite consensus disorder prediction 924 946 - -
Arst7g00056 946 Gene3D - 725 765 - -
Arst7g00056 946 MobiDBLite consensus disorder prediction 886 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00056 Arst-Chr7 317817 321690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00056 23 893 Ion Channels AT2G17260 61.781 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00056 K05387 - gmx:100793969 1244.18