Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00049 ATGGGCAACACATGCCGTGGATCTTTGAGAGGAAAATATTTTCAGGGCTTCAGCCAGCCCGAAGACCCCTCCAGGCGCAGCAATCCTTCTGACCCCTCCGACTCAGAGCACCTCCCCAAGCAGAATCCCAATTCAGCAGACAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACATCAACAACAACAAGAGAAATCTACCCTTCAAGAAGGACACCATCATGCGCAGAGGCCCCGACAACCAAGCTTATTATGTCCTGGGTCATAAGACTCACAACATTCGTGATCTCTACACTCTTGGCCGCAAACTGGGTCAGGGCCAATTTGGCACCACTTATTTATGCACCGAGAATTCCACCAACATCGAATACGCATGTAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAGGACGTGGAAGACGTTAGGAGAGAAATTCAAATAATGCACCATTTAGCTGGTCACAAGAACATCGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTACGTCCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAAAGGGGCCACTACACCGAGAGGAAGGCTGCTGAGTTGACCAAAATCATTGTTGGAGTTGTTGAGACTTGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTATTCACTGACGTGGTTGGCAGTCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGCCCCGAAGCAGATGTGTGGACAGCAGGCGTCATTCTATACATATTACTTAGTGGAGTGCCGCCGTTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGGCATATAGATTTCGACTCTGATCCATGGCCTTTAATTTCTGATAGTGCTAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCCGACAGAGCATTGGACCCTGCTGTTCTTTCCCGCCTTAAACAGTTCTCTGCAATGAACAAACTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAGATGTTTCAAGCTATGGATACTGATAACAGTGGTGCAATTACTTTTGATGAGCTTAAAGCTGGTCTAAGAAGATATGGGTCAACCCTTAAGGATACAGAAATACGTGATCTTATGGAGGCGGTAGGGCATAGTTCTATGAAAATTATCCATCTGTATTTTGTGTACCTACCCCCTTCTTTATTTTCCTCCCTTTTGTTCACATTGTGTTCCATCCAGCTGAAACATTTGTTATTTCAGGCTGATGTGGACAATAGTGGGACTATAGATTATGGAGAGTTTATCGCTGCAACAATTCATCTCAACAAGCTAGAGCGCGAGGAACATCTCATTGCAGCATTTCGATATTTTGACAAGGATGGGAGTGGCTATATTACAGTTGACGAACTTCAACAAGCTTGTATAGAACATAACATGACTGACGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAGGCAATGCTGGAATTGGAAGGAGGACTATGCGCAACAGCCTGAATTTAAGCATGAGAGATGCACCAGGTGTCTGA 1809 0.4406 MGNTCRGSLRGKYFQGFSQPEDPSRRSNPSDPSDSEHLPKQNPNSADNNNNSNNNNNNNNNNNINNNKRNLPFKKDTIMRRGPDNQAYYVLGHKTHNIRDLYTLGRKLGQGQFGTTYLCTENSTNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAVGHSSMKIIHLYFVYLPPSLFSSLLFTLCSIQLKHLLFQADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFRYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQGNAGIGRRTMRNSLNLSMRDAPGV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00049 602 Gene3D - 376 455 - -
Arst7g00049 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Arst7g00049 602 MobiDBLite consensus disorder prediction 34 70 - -
Arst7g00049 602 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Arst7g00049 602 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Arst7g00049 602 Gene3D - 516 599 - -
Arst7g00049 602 CDD STKc_CAMK 102 359 - -
Arst7g00049 602 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Arst7g00049 602 SMART serkin_6 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00049 602 Pfam Protein kinase domain 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00049 602 ProSiteProfiles EF-hand calcium-binding domain profile. 553 583 IPR002048 GO:0005509
Arst7g00049 602 Gene3D Phosphorylase Kinase; domain 1 104 187 - -
Arst7g00049 602 SUPERFAMILY EF-hand 384 580 IPR011992 -
Arst7g00049 602 PANTHER SERINE/THREONINE-PROTEIN KINASE 93 573 - -
Arst7g00049 602 FunFam Calmodulin A 468 580 - -
Arst7g00049 602 ProSitePatterns EF-hand calcium-binding domain. 561 573 IPR018247 -
Arst7g00049 602 ProSiteProfiles Protein kinase domain profile. 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst7g00049 602 ProSiteProfiles EF-hand calcium-binding domain profile. 514 549 IPR002048 GO:0005509
Arst7g00049 602 Pfam EF hand 408 434 IPR002048 GO:0005509
Arst7g00049 602 FunFam Calcium-dependent protein kinase 5 188 368 - -
Arst7g00049 602 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
Arst7g00049 602 FunFam Calcium-dependent protein kinase 1 104 187 - -
Arst7g00049 602 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Arst7g00049 602 SUPERFAMILY Protein kinase-like (PK-like) 85 384 IPR011009 -
Arst7g00049 602 Gene3D - 469 515 - -
Arst7g00049 602 Gene3D Transferase(Phosphotransferase) domain 1 188 370 - -
Arst7g00049 602 Pfam EF-hand domain pair 517 578 IPR002048 GO:0005509
Arst7g00049 602 MobiDBLite consensus disorder prediction 1 70 - -
Arst7g00049 602 SMART efh_1 407 435 IPR002048 GO:0005509
Arst7g00049 602 SMART efh_1 552 580 IPR002048 GO:0005509
Arst7g00049 602 SMART efh_1 518 546 IPR002048 GO:0005509
Arst7g00049 602 SMART efh_1 482 510 IPR002048 GO:0005509
Arst7g00049 602 Gene3D - 386 400 - -
Arst7g00049 602 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00049 Arst-Chr7 279975 286127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00049 1 599 EF-hand Containing Proteins AT2G17290 76.733 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst7g00049 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00049 K13412 - qsa:O6P43_002195 974.541