Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00010 TTTGCTCTTGATATAGCACTGGGAATTGGTGGACTTCCAAAGGGACGTGTTGTAGAAATATATGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTACATGTGATTTCAGAGGCACAGAAGCAAGGAGTAGGGAAGTTACCAGCATCTCAGGCTAATCCTGAAATGGTCTCTGCTTTTAGAAGAGAGGAAAAAGAACAGGTCATGAGGCTTTTGGACAATTACTTGAGAATTTGCCGTGCAGCTAAGGTTAAGGCAAGCTTTATGATGACAGAAGCTGATCAAGTCCAGAAAGGGATTGTTGCTTTGGTTGTCGGGCATAATATTAGGAGGCTTGTTATTGGAGCAATGCCCGAAGGTTGGATGAAAGTCAAAAGGAATTCCAGGAAAGCAAATTATGCTGCCAAAAATGCACCCCCCTTCTGTAAAATATGGTTTATCTATAGAGGTAAACATATTTGGACAAGAGAAGCTTCTGAAAAACCTTGTTCTTTATCACTGTGTGAAACAATTGAAACAGAAGGCACTTTTGCCGCCGAATCAACTACATCCAGCGGTCCATTGCCCTAA 570 0.4211 MWLGRSVSPRHVPVVSSGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVISEAQKQGVGKLPASQANPEMVSAFRREEKEQVMRLLDNYLRICRAAKVKASFMMTEADQVQKGIVALVVGHNIRRLVIGAMPEGWMKVKRNSRKANYAAKNAPPFCKIWFIYRGKHIWTREASEKPCSLSLCETIETEGTFAAESTTSSGPLP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00010 208 Pfam recA bacterial DNA recombination protein 3 62 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst7g00010 208 ProSiteProfiles RecA family profile 1. 11 62 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Arst7g00010 208 PANTHER RECA 1 68 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst7g00010 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 134 IPR027417 -
Arst7g00010 208 Gene3D - 10 69 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00010 Arst-Chr7 103745 105503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00010 46 178 U-box Gene Family AT2G45910 36.957 3.48e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00010 - - adu:107496015 413.305