Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04289 ATGAGTTGGAGAACTCTATTCTCCAGACACAAAAAACTCACTCCATTCTTACAATTTTCCCAAAATGCCCCTTTTCGCTCTTCAATATTCCATCCACTACCCTTTCCTCCCTCCACCGCCACCGCCACCTCCAGGAACTTTCACTCCTCCCGAGTCACCGCCCAACTCGGCGCCCAACTCGGTTCCCAGCTCAGAAACTCTCTCGTCCCTTCAGGCTCCATTGCCGACGAAGAAGACGCCGATGGAACCATGAACGAGTTCCTGTCCCGATTCGTGTGGATGATGCGGAAGAAGGTTCGGGAATCGTATCCTGATTCCGACAAGGGAACTGTCGACACCATGCTCCTCGTGATCGTCGAGCGCGTCGTTTCGGAGCTCGAGAAGGGAGGGTTCGATGGCGTCCTTGGGGCGGCGACGGCGACGTTTCGTCCCGGTGACAACGGCGATTTCAGCGAGGATTTGTGGAGGACCGTGTGGGAAGTGAGCAACAATGTGATCGAAGGAATGAATAAGGAGAGGAAGAAGGAGAAGATGAAAGGTTTCTTGCAGTGTGATGAGGTGAAGCAGATGTGCAGGTTTGCTGGCGAGGTTGGAATACGAGGGGACTTGCTTAGGGAGCTGAGGTTCAAGTGGGCACGTGAGAAGATGGAGGAGCATGAATTCTACGAGGGTTTGGAGTGCATGAGGAAAGAAGCCGAAGCTGAAGAACATGAAGAGGAGGAACAAGGGGGTACAGAACATGGGGATGCTGGTGTTGGTGTTGCTGAGGAAGGGGGTAAGGTTGTTGGACTTCCCAAGAGGAAGGGGAAGATAAGGTACAAGATTTATGGGCTCGATTTATCTGATCCAAAGTGGGCACGTGTGGCTGATAGGATCCATGAGGCAGGAGAGGTCATGTGGCCAAAGGAGGCAAAGCCAATAACTGGGAAATCCAAGATTGTTACCGAGAATATTCTGAAGTTAAAGGAGGAGGAGGGCAGTGATGAGTTGTTGAGGCTGTTAGCCGAGTGGGTGGAGCTCTTGCAACCCAGTAGGGTTGATTGGAAGAGCCTGCTTGACGGATTGAAACAGCAGAATCCACCCTTGTACTACAAGGTGGCGGAAATTGTATTGACTGAAGATTCTTTCCAAACAACTATATCTGACTACTGTAGGCTTATTGATGCCTATGCTAAAGAGAATCGGTTTGAAGATGTTGAGAGGATGGTAAAGAAGATGAACGAAAAAGGTATGGTACCAGATGCCTCAGCAGCAACCGAATTGCTCCACATGTACTGCAAGGCGGGAAATCTTGAGCGCGCAAAACAAGCATTTGAAATCTTGAAGGCCCAAGGCTTCCAGCCAAACGTAAAAGTCTACACCGCACTGATCATGGCCTATGTAAATTCCAACGATCCTGCAAAGGGTGAATATCTTCTTAGAGAGATGGATACAAAAGATGTTAAACCAACTAAGGAAATATACATGGCACTGCTGCGAGCATTTTCTAAACGCGGTGAAGTTACTGGAGCTGAACGGATTTCTACAATGATGCAGTTTGCAGGATTCCAGCAGACTAAGGAGACATGCACATTACTTGTTGAGGCACATGCAAATGCAGGTAACCCAGATGCGGCTAGAAGGAACTTTGATTACATGAAAAACTTGGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTGTGGCTTATGAGAAGAAAAACTTATTGGACAAAGCATTAGAACTTCTTTTGAAGCTCGAGAAGGATGGGTTTGTGCCTGGGGTTGCAACTTACTCTGTTCTGGTAGATTGGATGAGTAGGTTGCTGCTCGTTGATGAGGCCGAACATCTTTTAGGCAAAATTGCTCAGCAAGGCGAGGCTCCTCCGTTTAAGGTTCAAGTGAGTCTCTGTGATATGTATGCGAGGGCAGGAAATGAGAAAAAGGCCCTTCAAGCTCTTGGTGCTGTCGAAGCTAGGAAGGATGAATTGGAACATGCTGATTTCGAGAGAATAATCCAGAGCCTTCTTGCTGGCGGGTTTGAGCAGGATGCACGAAGAATGTGTGGCATCATGGAGGCGCAGGGTTTCGCTCTATCGGAATCCCTTCGGATGGCCCTTTTGAAACCTAGCCGCAAATTCCCAAAGTTTAGATAG 2139 0.4857 MSWRTLFSRHKKLTPFLQFSQNAPFRSSIFHPLPFPPSTATATSRNFHSSRVTAQLGAQLGSQLRNSLVPSGSIADEEDADGTMNEFLSRFVWMMRKKVRESYPDSDKGTVDTMLLVIVERVVSELEKGGFDGVLGAATATFRPGDNGDFSEDLWRTVWEVSNNVIEGMNKERKKEKMKGFLQCDEVKQMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLECMRKEAEAEEHEEEEQGGTEHGDAGVGVAEEGGKVVGLPKRKGKIRYKIYGLDLSDPKWARVADRIHEAGEVMWPKEAKPITGKSKIVTENILKLKEEEGSDELLRLLAEWVELLQPSRVDWKSLLDGLKQQNPPLYYKVAEIVLTEDSFQTTISDYCRLIDAYAKENRFEDVERMVKKMNEKGMVPDASAATELLHMYCKAGNLERAKQAFEILKAQGFQPNVKVYTALIMAYVNSNDPAKGEYLLREMDTKDVKPTKEIYMALLRAFSKRGEVTGAERISTMMQFAGFQQTKETCTLLVEAHANAGNPDAARRNFDYMKNLGHKPDDRCTASMIVAYEKKNLLDKALELLLKLEKDGFVPGVATYSVLVDWMSRLLLVDEAEHLLGKIAQQGEAPPFKVQVSLCDMYARAGNEKKALQALGAVEARKDELEHADFERIIQSLLAGGFEQDARRMCGIMEAQGFALSESLRMALLKPSRKFPKFR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04289 712 Pfam PPR repeat 560 586 IPR002885 -
Arst6g04289 712 Pfam PPR repeat 383 410 IPR002885 -
Arst6g04289 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 519 553 IPR002885 -
Arst6g04289 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 554 588 IPR002885 -
Arst6g04289 712 Coils Coil 222 242 - -
Arst6g04289 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 414 448 IPR002885 -
Arst6g04289 712 NCBIfam pentatricopeptide repeat 522 554 IPR002885 -
Arst6g04289 712 NCBIfam pentatricopeptide repeat 421 450 IPR002885 -
Arst6g04289 712 NCBIfam pentatricopeptide repeat 452 484 IPR002885 -
Arst6g04289 712 NCBIfam pentatricopeptide repeat 383 415 IPR002885 -
Arst6g04289 712 Pfam Pentacotripeptide-repeat region of PRORP 431 537 IPR033443 -
Arst6g04289 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 483 IPR002885 -
Arst6g04289 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 379 413 IPR002885 -
Arst6g04289 712 MobiDBLite consensus disorder prediction 232 246 - -
Arst6g04289 712 Gene3D Tetratricopeptide repeat domain 316 508 IPR011990 GO:0005515
Arst6g04289 712 Gene3D Tetratricopeptide repeat domain 509 704 IPR011990 GO:0005515
Arst6g04289 712 MobiDBLite consensus disorder prediction 232 256 - -
Arst6g04289 712 PANTHER OS07G0661900 PROTEIN 94 699 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04289 383 711 Glycosyltransferase AT1G05670 22.492 8.38e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04289 - - lang:109358423 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04289 6 110834378 110837453 Arst6g04289 6 110834378 110837453 ECH