Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04225 ATGAATATATTGGCAGGTAATGTTGCATCAGCCACATTATTCACCCTACGAAACAATTGCAAATACAATGTTTGGCCCGGAAGTCTTTCCGGCAATGGCCCAAATATTCTTGACACCGATCTTTCTTTAAGACCCGGTTCTTCGGCCCAATCAAATGTTCCGGCTGGTTGGTCAGGACGTTTTTGGGCTAGAACCGAGTGTAATTTTGATAGGACCGGTAACGGCAAATGTGCTACAGGAGACTGTCTCGGTGGTCTCAAGTGTATCGGCGGAGGTGCTCCGCCGGTAACACTGGCCGAGTTCACGGTTGGAAGTGCCGGCAACGGCAATATGGATTTTTATGATGTGAGCTTGGTAGACGGTTACAATGTTCCTATAGGGATACATGCAACCGGAGGGACCGGTAACTGTCAATATGCTGGTTGCGTTTCTGACCTAAATGATAACTGTCCAAAGGAGTTACAGGTAAAAGATGTTACCGGTTTGGTAGTTGCATGCAAGAGCGCGTGTGCGGCATTCAACAGTCCGGAGTATTGTTGCACCGGGGAGCACGGAACACCACAGACATGCCCACCTACAAATTACTCAAAAATGTTTAAGATTGCATGTCCAAGAGCTTATAGTTATGCTTATGATGATGCTTCGAGCACTTGTACATGTTCTGGAGCAAATTACACCATCACTTTTTGCCCCACAGAATCCTCATAA 708 0.4647 MNILAGNVASATLFTLRNNCKYNVWPGSLSGNGPNILDTDLSLRPGSSAQSNVPAGWSGRFWARTECNFDRTGNGKCATGDCLGGLKCIGGGAPPVTLAEFTVGSAGNGNMDFYDVSLVDGYNVPIGIHATGGTGNCQYAGCVSDLNDNCPKELQVKDVTGLVVACKSACAAFNSPEYCCTGEHGTPQTCPPTNYSKMFKIACPRAYSYAYDDASSTCTCSGANYTITFCPTESS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04225 235 Gene3D Thaumatin 12 231 IPR037176 -
Arst6g04225 235 PANTHER OS03G0233200 PROTEIN 10 231 IPR001938 -
Arst6g04225 235 PIRSF PR5 1 235 IPR001938 -
Arst6g04225 235 Pfam Thaumatin family 18 231 IPR001938 -
Arst6g04225 235 FunFam Thaumatin-like protein 1a 12 231 - -
Arst6g04225 235 CDD TLP-PA 14 230 - -
Arst6g04225 235 PRINTS Pathogenesis-related protein signature 60 71 IPR001938 -
Arst6g04225 235 PRINTS Pathogenesis-related protein signature 73 102 IPR001938 -
Arst6g04225 235 PRINTS Pathogenesis-related protein signature 221 230 IPR001938 -
Arst6g04225 235 PRINTS Pathogenesis-related protein signature 13 25 IPR001938 -
Arst6g04225 235 SMART tha2 14 231 IPR001938 -
Arst6g04225 235 SUPERFAMILY Osmotin, thaumatin-like protein 13 231 IPR037176 -
Arst6g04225 235 ProSitePatterns Thaumatin family signature. 73 88 IPR017949 -
Arst6g04225 235 ProSiteProfiles Thaumatin family profile. 11 231 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04225 Arst-Chr6 110320338 110321045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04225 14 235 Receptor kinase-like Gene Family AT5G38280 48.261 9.39e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04225 - - aip:107605729 402.905