Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04224 ATGGCCCTAACCTCATTAAGCTCAAAGTCTTGTGCAACCTTCTGGCTTTTCCTCCTCTTAGGTAATGTAGCATCAGCTACATTGTTTACCCTACAAAACAATTGCAAATACACTGTTTGGCCTGGAACACTTTCCGGCAATGACCCGACCATTCTTGACACCGGTCTTTCTCTAACATCCGGTTCTTTGGTCCAGATGACCGCCCCAGCTGGCTGGTCAGGACGATTCTGGGGTAGAACCGGATGTAACTTCGATATGGCTGGTAATGGCAAATGTGCCACCGGAGACTGTCCCGGTGGCCTCAAGTGCACTGGTGGAGGCGTTCCACCAGTGACACTAGTGGAATTCACCACCGGAAGTGCGACCAACGGCAACAAAGATTTTTATGACGTAAGCTTGGTGGATGGTTACAATGTGGCCATTGGAGTACGGGCAACCGGAGGAACCGGTAATTGTCAATACGCAGGTTGCGAAAATGACCTGAATGGTTACTGCCCAAAGGAGTTGCAAGTAAAAGATGATACGGGTTCGGTAGTAGCATGTAAGAGCGCGTGTGTGGCGTTTAACACCCCGAAGTATTGTTGCACCGGGGAGCACTCAACGCCACAAACGTGCTCACCTACGAATTACTCAAAGATGTTTAAGAATGCATGTCCAAGAGCTTATAGTTACGCTTATGATGATGCTTCAAGCACTTTTACATGCTCAGGTGCAAATTACACCATCACTTTTTGCCCCGCAGGATCATCTTAG 753 0.4834 MALTSLSSKSCATFWLFLLLGNVASATLFTLQNNCKYTVWPGTLSGNDPTILDTGLSLTSGSLVQMTAPAGWSGRFWGRTGCNFDMAGNGKCATGDCPGGLKCTGGGVPPVTLVEFTTGSATNGNKDFYDVSLVDGYNVAIGVRATGGTGNCQYAGCENDLNGYCPKELQVKDDTGSVVACKSACVAFNTPKYCCTGEHSTPQTCSPTNYSKMFKNACPRAYSYAYDDASSTFTCSGANYTITFCPAGSS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04224 250 Pfam Thaumatin family 33 246 IPR001938 -
Arst6g04224 250 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Arst6g04224 250 SUPERFAMILY Osmotin, thaumatin-like protein 28 247 IPR037176 -
Arst6g04224 250 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Arst6g04224 250 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Arst6g04224 250 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Arst6g04224 250 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Arst6g04224 250 PIRSF PR5 1 250 IPR001938 -
Arst6g04224 250 PANTHER OS03G0233200 PROTEIN 16 246 IPR001938 -
Arst6g04224 250 SMART tha2 29 246 IPR001938 -
Arst6g04224 250 FunFam Thaumatin-like protein 1a 27 246 - -
Arst6g04224 250 ProSiteProfiles Thaumatin family profile. 26 246 IPR001938 -
Arst6g04224 250 CDD TLP-PA 29 245 - -
Arst6g04224 250 Gene3D Thaumatin 27 246 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04224 Arst-Chr6 110316805 110317982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04224 16 246 Receptor kinase-like Gene Family AT5G38280 45.679 5.92e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04224 - - aip:107605729 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04224 6 110316805 110317982 Arst6g04224 6 110316805 110317982 ECH