Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04218 ATGGCATTCTTAATCTTCAAATCTCAACCTCCTTACAACACCATCACCACAATCTCCAACCTCACTTCTTCAAACCCAATAGACCTTGCAAGAATCAATGATGTCACTACTTCACACACAATGTTCCAAATTGGTAAAGAGGTTATTGTCCCTTTGAAATGCTCTTGTTCTTCAATGAAGGACACCAAGTATTACTATTACCAATCCAAAACCAAACATGTCTTGGGTGCAATTTTGCCAGAAACAACATATTTCAATGTTGCAAATGAAACTTTCCAAGGCTTAACCACTTGTGATTCCCTAAAGAGGTTCAATCCTTATCCGGAGCGCGATTTGCGCCCCGGCATGGAGTTGAATGTTCCATTAAGGTGTGCTTGTCCAACATGGAATCAAGAAAGAAATGGCACCAAGTATTTGATGACTTATTCTGTGAATTGGGGTGACACCATTTCTAGCATTGCATCAAGATTCAATGCAACAATACATAATCTTCTTGAAGCCAATGTGTTTTTGATAGGAAAGATATCAAAAAGATTCATCAAGGCAGGCAAAATCCATAAGAGAAATGGCGTGATTTCAGAAGATATCCGCGTCGAAATAGCGAGCATTGATGTGAACTATTCCAAATTGTACAAGTTTGAGGAAATCAAGGATGCTACCGAAAATTTCAGTTCAAGGAACAGAATCAAAGGTTCTGTATTTCACGGCGAATTCGGTAACAAAAGGGAAAGTTTTGCTGTCAAAAGAAGAATAAGTAAAGGGTATGCTTCAAAGGAAATAAATTTGCGTAGAAGAATCAACCATTTCAACTTGATCAAGCTTCAAGGATATTGTGAAAATGAAGATTTGTTCTATCTTGTGTTTGAATTCATGGAAAATGGTTCCTTAAGAGAATGGCTTAGTAGTGAAGAAAACTCATTTTTGCATAAAAGTTGGTCAAAGAGGATTCAAATTGCTTTGGATATTGCAAATGGACTTCAATATCTTCACAACTTCACATATCCTTGTTATGTTCACCATGGTATTAACACTGGAAACATTCTTCTAAACAAAGATCTAAGGGCAAAGATAGCAAATTTTTCTCTAGCAGAAGAATTATTAGAAAAGAGCATGATAACAAGTTCAAGTTCTTCTCGCACTTCAGATGATGTTTATGCCTTTGGAGTGGTACTTTTGGAATTGATCACTGGCAAAGAATGTGTTACACTACATGGTTTATCAAGAGAAGGAATAATAATGGTTTCTAGGATCATGATGAATAATCTCATTGGTAAGGAGCATGAAGAAGAAGAGAAGTTGAGTTTGTTCTTTGATCCAAGGCTCATTGGAAACATTGAGAGAAAAAGTGCTTTGATGCTAGTTAAGCTAAGTTTAGGTTGCTTGAATCAAGAATCAGAAAGTAGACCAAACATGTCAGAGGTGGTCTCTACCTTGTGGAAAACACTTTCTGAGTCCCATAATAATTGTTGGAGTGAGAAAATTGTCATGTTGAAATGTTAA 1500 0.3647 MAFLIFKSQPPYNTITTISNLTSSNPIDLARINDVTTSHTMFQIGKEVIVPLKCSCSSMKDTKYYYYQSKTKHVLGAILPETTYFNVANETFQGLTTCDSLKRFNPYPERDLRPGMELNVPLRCACPTWNQERNGTKYLMTYSVNWGDTISSIASRFNATIHNLLEANVFLIGKISKRFIKAGKIHKRNGVISEDIRVEIASIDVNYSKLYKFEEIKDATENFSSRNRIKGSVFHGEFGNKRESFAVKRRISKGYASKEINLRRRINHFNLIKLQGYCENEDLFYLVFEFMENGSLREWLSSEENSFLHKSWSKRIQIALDIANGLQYLHNFTYPCYVHHGINTGNILLNKDLRAKIANFSLAEELLEKSMITSSSSSRTSDDVYAFGVVLLELITGKECVTLHGLSREGIIMVSRIMMNNLIGKEHEEEEKLSLFFDPRLIGNIERKSALMLVKLSLGCLNQESESRPNMSEVVSTLWKTLSESHNNCWSEKIVMLKC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04218 499 Gene3D LysM domain 139 185 IPR036779 -
Arst6g04218 499 CDD LysM 141 183 IPR018392 -
Arst6g04218 499 Gene3D Phosphorylase Kinase; domain 1 195 290 - -
Arst6g04218 499 SUPERFAMILY Protein kinase-like (PK-like) 213 488 IPR011009 -
Arst6g04218 499 ProSiteProfiles LysM domain profile. 140 188 IPR018392 -
Arst6g04218 499 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 199 486 - -
Arst6g04218 499 Pfam LysM domain 142 184 IPR018392 -
Arst6g04218 499 ProSiteProfiles Protein kinase domain profile. 223 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04218 499 Pfam Protein kinase domain 235 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04218 499 Gene3D Transferase(Phosphotransferase) domain 1 291 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04218 Arst-Chr6 110257616 110259731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04218 210 485 Receptor kinase-like Gene Family AT2G33580 36.755 1.52e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst6g04218 PK_Tyr_Ser-Thr 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04218 - - aip:107647804 588.571