Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04213 ATGCGACGAGAACAAGTCCAGCCCGCTTGCCTTTCAGATTTTGAGCCAGATAGATTGAGTTGCTTACCTGGTCATGTTATAGACCAAATTCTTTCGCATTTGCCCCTTCGGGAAGCAGTGAGAACAAGTGTGTTATCAAGCAAATGGAGGTACAAATGGGCAACGCTACCAAATCTTGTGTTTGATAACCAATGTCACTCGGTAGCTTCCCAAGATCATTCAGATATCAAGAACAAGCTTTTGAGAATCATCGATCACGTACTTTTACTTCATGCTGGGGCAATCAACAAGTTCAAGCTCTCCCATCGCGATCTCATTGGTGTGACTGATATTGATCGTTGGTCACTTCATCTAACCAGAAGGTCTGTCAAGGAGTTTGTGCTGGAAATCTGGAAAGGGCAGCGCTATAAGATACCATCGTGCTTATTTGCTTGTCAAAGTTTAGTTCATTTAGAATTGTTTAATTGTTGGCTTAAGCCTCCATCGACATTTCAAGGCTTTAAGAACTTGAAGAGTCTTGATCTGCAGCATGTTACCTTGGCTCAAGATGTGTTTGAAAACTTAATATCTAGCTGCCCCATGCTGGAACGATTAACGTTGATGAACTTTGATGGTTTCGCTAATCTCAACATTGATGCACCTAATCTTCAATTTTTCGATATTGGAGGCAAATTTGAAGATATCAGCTTCGAGAACACTTTCCAGTTATCTGTAGTATCCATTGGTTTGTATTTGAACTTTGAAACCAATCAAAATAGATTGCGTGGCAGTTCAAGCAATTTGCTCAAGTTTTTTGTTCATCTCCCTCATGTTCGAAGGCTAGAGGTTCAAAGCTATTTCTTAAAGTATTTGGCAATAGGGGCTGTGCCGCTAAAGCTTCCAAGACCATGCATTGATCTTAGTTACCTCTCCATTCGTATGAACTTCAATGATTCAAAGGAAATTTCAACTGCTTTATGCCTGCTAAGAAGCTCTCCTAATCTGCAAGAACTAGAAGTATTGGCTCGCCCTGACGAGCAGAACGTCCTGATACACCCTTATTGCGGGGAAGATGAATATTGTAGTTGTCCTATCATGCAACTGCGACATGTGAGGATAGATGGTGTCTCTGGTACCAAACCCGAATTAGATTTTATCAGTTTTCTGCTTCTGTATTCGCCGGTGCTAGAAAGGATGACTGTGAAGCCGGTTTCAAGTGGAGTGACTGAGTTGATGAAAGAGTTATTAAGGTTCAGAAGAGCTTCAGGGCGAGCTGAAATCATTTACCAAGAATCTCCTTGA 1281 0.4145 MRREQVQPACLSDFEPDRLSCLPGHVIDQILSHLPLREAVRTSVLSSKWRYKWATLPNLVFDNQCHSVASQDHSDIKNKLLRIIDHVLLLHAGAINKFKLSHRDLIGVTDIDRWSLHLTRRSVKEFVLEIWKGQRYKIPSCLFACQSLVHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPMLERLTLMNFDGFANLNIDAPNLQFFDIGGKFEDISFENTFQLSVVSIGLYLNFETNQNRLRGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAIGAVPLKLPRPCIDLSYLSIRMNFNDSKEISTALCLLRSSPNLQELEVLARPDEQNVLIHPYCGEDEYCSCPIMQLRHVRIDGVSGTKPELDFISFLLLYSPVLERMTVKPVSSGVTELMKELLRFRRASGRAEIIYQESP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04213 426 Gene3D Ribonuclease Inhibitor 113 408 IPR032675 -
Arst6g04213 426 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Arst6g04213 426 Pfam F-box domain 19 51 IPR001810 GO:0005515
Arst6g04213 426 SUPERFAMILY RNI-like 116 332 - -
Arst6g04213 426 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Arst6g04213 426 PANTHER F-BOX PROTEIN-LIKE 17 397 - -
Arst6g04213 426 SMART 9598neu4hmm 355 423 IPR006566 -
Arst6g04213 426 SUPERFAMILY F-box domain 16 61 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04213 Arst-Chr6 110209431 110212221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04213 17 217 EF-hand Containing Proteins AT5G41840 26.724 1.27e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04213 - - gmx:100782183 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04213 6 110209431 110212221 Arst6g04213 6 110209431 110212221 ECH