Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04197 ATGGCATTCTTAATCTTCAAATCTCAGCCTCCTTACAACACCATCACCACAATCTCCAACCTCACTTCTTCAAACCCAATAGACCTTGCAAGAATCAATGATGTCACTACTTCACACACAATGTTCCAAATTGGTAAAGAGGTTATTGTCCCTTTGAAATGCTCTTGTTCTTCAATGAAGGACACCAAGTATTACTATTACCAATCCAAAACCAAACATGTCTTGGGTGCAATTTTGCCAGAAACAACATATTTCAATGTTGCAAATGAAACTTTCCAAGGCTTAACCACTTGTGATTCGCTAAAGAGGTTCAATCCTTATCCGGAGCTCGATTTGCGTGCCGGCATGGAGTTGAATGTTCCATTAAGGTGTGCTTGTCCAACATGGAATCAAGAAAGAAATGGCACCAAGTATTTGATGACTTATTCTGTGAATTGGGGTGACACAATTTCTAGCATTGCATCAAGATTCAATGCAACAATACAGAATCTTCTTGAAGCCAATGGTATTTCCATGGAAACTACAATTTTTCCATTCACAACTCTTCTGATTCCTTTGCCAAGTGAACCACTGAGTTCATCAACAATCATAGTTGCCAATGATCCACCATATGATTCTACTTCACCACATGCCAAAACCGGTTCCAAAGGGATCGAGTTAAAGAAACTAGTAATATTCAATATAGTTCTTGCTGCTATATTGATTCTGAGCATCATGTCATCTCTAGTGTCTTTGATAGGAAAGATATCAAAAAGATTCATCAAGGCAGGCAAAATCCGTAAGAGAAATAGCGCAATTTCAGAAGATATCCGCGTTGAAATAACAAGCATTGATGTGAACTATTCCAAATTGTACAAGTTCGAGGAAATCAAGGATGCTACTGAAAATTTCAGTTCAAGGAACAGAATCAAAGGTTCTGTATTTCATGGCGAATTCGGTAACAAAAGGAAAAGTTTTGCTGTCAAAAGAAGAATAGTAAAGGATTTGTTCTACCTTGTATTTGAATTCATGGAAAATGGATCCTTAAGAGAATGGCTTAGTAGTGAAGAAAACTCATTTTTGCATAAAAGTTGGTCAAAGAGGATTCAAATTGCTTTGGATATTGCAAATGGACTTCAATATCTTTACAACTTCACATATCCTGGTTATGTTCACAATGGTATTAACACTGGAAACATTCTTCTAAACAAAGATCTAAGGGCAAAGATAGCAAATTTTTCTCGTGCAGAAGAATTATTAAAAAGGAGAATGATAACAAGTTCAATTTCTTCTCACACTTCAGATGATGTTTATGCCTTTGGAGTGGTACTTTTGGAATTGATCACTGGCAAAGAATGTGTTACACTGCATGGTTTATTAAGAGAAGGAATAATAATGGTTTCTAGGATCATGATGAATAAACTCATTGGTAAGGAGTATGAAGAAGAAGAGAATTTGAGTTTGTTCTTTGATCCAAGGCTCATTGGAAACATTGAGAGAAAAAGTGCTTTGATGCTAGTTAAGCTAAGTTTAGGTTGCTTGAATCAAGAATCAGAAAGTAGACCAAACATGTCAGAGGTGGTCTCTACCTTGTGGAAAACACTTTCTGAGTCCCATAATAATTGTTGGAGTGAGAAAATTGTCATGTTGAAATGTTAA 1638 0.362 MAFLIFKSQPPYNTITTISNLTSSNPIDLARINDVTTSHTMFQIGKEVIVPLKCSCSSMKDTKYYYYQSKTKHVLGAILPETTYFNVANETFQGLTTCDSLKRFNPYPELDLRAGMELNVPLRCACPTWNQERNGTKYLMTYSVNWGDTISSIASRFNATIQNLLEANGISMETTIFPFTTLLIPLPSEPLSSSTIIVANDPPYDSTSPHAKTGSKGIELKKLVIFNIVLAAILILSIMSSLVSLIGKISKRFIKAGKIRKRNSAISEDIRVEITSIDVNYSKLYKFEEIKDATENFSSRNRIKGSVFHGEFGNKRKSFAVKRRIVKDLFYLVFEFMENGSLREWLSSEENSFLHKSWSKRIQIALDIANGLQYLYNFTYPGYVHNGINTGNILLNKDLRAKIANFSRAEELLKRRMITSSISSHTSDDVYAFGVVLLELITGKECVTLHGLLREGIIMVSRIMMNKLIGKEYEEEENLSLFFDPRLIGNIERKSALMLVKLSLGCLNQESESRPNMSEVVSTLWKTLSESHNNCWSEKIVMLKC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04197 545 Gene3D LysM domain 139 197 IPR036779 -
Arst6g04197 545 SUPERFAMILY Protein kinase-like (PK-like) 278 531 IPR011009 -
Arst6g04197 545 ProSiteProfiles Protein kinase domain profile. 240 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04197 545 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 323 - -
Arst6g04197 545 Pfam LysM domain 142 185 IPR018392 -
Arst6g04197 545 Gene3D Transferase(Phosphotransferase) domain 1 319 531 - -
Arst6g04197 545 Pfam Protein tyrosine and serine/threonine kinase 329 524 IPR001245 GO:0004672|GO:0006468
Arst6g04197 545 ProSiteProfiles LysM domain profile. 140 184 IPR018392 -
Arst6g04197 545 SUPERFAMILY LysM domain 140 186 IPR036779 -
Arst6g04197 545 SMART LysM_2 141 185 IPR018392 -
Arst6g04197 545 CDD LysM 141 184 IPR018392 -
Arst6g04197 545 Coils Coil 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04197 Arst-Chr6 110002658 110004628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04197 2 538 Receptor kinase-like Gene Family AT2G23770 31.186 5.99e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst6g04197 PK_Tyr_Ser-Thr 9.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04197 - - adu:107495902 1040.41