Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04185 ATGGAAAATGATATGTTCTTCCATCAGGGATGGCCATCGTTTGTGGGAGATCATCATCTGGAATGCGGTGATCTGTTGGTTTTCAGATATGAAGGTTACCTAAATTTCACCGTGCAAGTATTTGACAAGAATAAATGTGAAAAACTGGGATTAAATTCTGAATGCAGTCAAAATTCAGGCAACTTTGATAATATAAGAGGTCACAAAAGAGATAGGAATGAGAAATCCTCTCTGGATGTTATTGTTGAAGGGGCTACAAAGAAAATGAGAGGCAACAATGCCGACAACCAAGAACTTAAGCTGAGTATAGTTGGGAAAGACATATTGCAATATGAGTTAGTAAAACCTATTAGTATGTTCAAAGAAAAAGAAGAAACTTCCAGAGCATGTTCAACTAATGACATTCCGTTGCCTTTTCATGTGGGGAATAGCAATGAAGATGAAGATGCTGATCAATATATTCTGAATGGTATTTCACTATCAAACTTAGCAGCACATGATGAGAAAAAAGTAGCTCGATCATTTACTTCATCTTTTCCATATTTTGTAAGGATCATGAAAAGCTTCAACGTTAGCGGTTCATATACTCTGAATATCCCGTATCAATTTTCAATGGCACATCTCCCAAACTGCAAGATAAAGATTATCCTCCATAATTTGAAAGGAGAACATTGGACTGTTAATTCTGTGCCATCAACAAGAGTGCATACAAGTCACACTCTCTGCGGAGGATGGATGGCCTTTGTGCGTGGCAATAACATAAAGGTTGGAGATGTCTGCATTTTTGAACTCGTGCATGAGTGTGAATTACTTGTTCGTATTGCTGGAGGTGGAAAAGATCTACAAGACCCGGTTGCGAAACCAGATTTAAGTAACCCTAGTGCAGGACATGCTATCACTTGCCATAAGGCTTCAAGATATATGTCGGTGAATCCTAAAGACAACCCAAAAAACATAATAAACGTTGATCAATCAGTTAAAAAGCGGTCAAAGGTTGGTCAAGAAGCTGCTTTTTCCATTGAATTAAGGAAATCTGGTAAAAGATCAAATTCTTCTAAGAAAACGGGGCTTGGCAATCGGACGAAAGCTGCCAATAAAAAGTTGGCAGAGACAGCTGCTCAGAAGAGGCATCGTGTTGAAGATGAATTAAGCTCACAAGCTAATGCTGGTTTGAGAATGTTGTTTGCACTCGATGAACAAAGAGTGGCTCAAGCCTTTACTTCCCCTTTTCCTAATTTTGTGAAAATCATGAAAAAGTTCAATGTCAGTGGATCATACACTTTGAAAATCCCATACCAGTTCTCTGCTGCACATCTCCCAGCCTACAAAACAGAAATTATTCTTCGAAATTTAAAAGGTGAAAGTTGGACTGTGAACTCTGTACCGGACGCAAAAGGCAGAACGGTGCATACCTTTTGTGGTGGATGGATGGCCTTTGTTCGCGATAATGACATCAATTTTGGGGACACATGCATATTCGAACTTGTTGCTCAGGGTGAGATGCGGGTTTATATATCTGGGGTGGGAAAGGAGGGGCTTGAACATCAAAATGGTCAAGTGAAACTTAATAGATTATTGGCCAACGTTCCATCTACCTGCTAA 1602 0.3939 MENDMFFHQGWPSFVGDHHLECGDLLVFRYEGYLNFTVQVFDKNKCEKLGLNSECSQNSGNFDNIRGHKRDRNEKSSLDVIVEGATKKMRGNNADNQELKLSIVGKDILQYELVKPISMFKEKEETSRACSTNDIPLPFHVGNSNEDEDADQYILNGISLSNLAAHDEKKVARSFTSSFPYFVRIMKSFNVSGSYTLNIPYQFSMAHLPNCKIKIILHNLKGEHWTVNSVPSTRVHTSHTLCGGWMAFVRGNNIKVGDVCIFELVHECELLVRIAGGGKDLQDPVAKPDLSNPSAGHAITCHKASRYMSVNPKDNPKNIINVDQSVKKRSKVGQEAAFSIELRKSGKRSNSSKKTGLGNRTKAANKKLAETAAQKRHRVEDELSSQANAGLRMLFALDEQRVAQAFTSPFPNFVKIMKKFNVSGSYTLKIPYQFSAAHLPAYKTEIILRNLKGESWTVNSVPDAKGRTVHTFCGGWMAFVRDNDINFGDTCIFELVAQGEMRVYISGVGKEGLEHQNGQVKLNRLLANVPSTC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04185 533 SMART B3_2 182 278 IPR003340 GO:0003677
Arst6g04185 533 SMART B3_2 413 509 IPR003340 GO:0003677
Arst6g04185 533 CDD B3_DNA 411 505 IPR003340 GO:0003677
Arst6g04185 533 Gene3D - 1 46 IPR015300 -
Arst6g04185 533 MobiDBLite consensus disorder prediction 343 366 - -
Arst6g04185 533 SUPERFAMILY DNA-binding pseudobarrel domain 175 275 IPR015300 -
Arst6g04185 533 Gene3D - 164 276 IPR015300 -
Arst6g04185 533 Gene3D - 398 508 IPR015300 -
Arst6g04185 533 SUPERFAMILY DNA-binding pseudobarrel domain 3 48 IPR015300 -
Arst6g04185 533 CDD B3_DNA 180 274 IPR003340 GO:0003677
Arst6g04185 533 ProSiteProfiles B3 DNA-binding domain profile. 413 509 IPR003340 GO:0003677
Arst6g04185 533 ProSiteProfiles B3 DNA-binding domain profile. 1 44 IPR003340 GO:0003677
Arst6g04185 533 CDD B3_DNA 3 42 IPR003340 GO:0003677
Arst6g04185 533 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 280 IPR044837 -
Arst6g04185 533 ProSiteProfiles B3 DNA-binding domain profile. 182 278 IPR003340 GO:0003677
Arst6g04185 533 Pfam B3 DNA binding domain 182 273 IPR003340 GO:0003677
Arst6g04185 533 Pfam B3 DNA binding domain 413 505 IPR003340 GO:0003677
Arst6g04185 533 SUPERFAMILY DNA-binding pseudobarrel domain 406 507 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04185 Arst-Chr6 109874070 109877127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04185 379 512 B3 DNA Binding Superfamily AT5G42700 32.090 8.25e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst6g04185 B3 2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04185 - - adu:107495829 1078.16