Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04182 ATGAGCAGTAGGAAAGGTTTCTGCTTCTCCCGCTTAAAGTTGCTGCTCCTGATTGTTACAGTTGCAGCAGCTGCTGATCATAACAGAACATGTACGCCCTCCGCATGCGGCAAAGTCACCACCATAACACATCCTTTCCGGCTGAGGGGCGACCCTGCAAGCTGTGGCGACCGGAGGTACGAGTTGTCTTGCGAGAATAACATCACCCTCTTATATCTTTTTCCCGGTAAAACCTACCATGTTCAGGCAATAAACTACAACAACTTCACGATCCGGCTTCTAGATCCAGCCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCTAACCAATTTCAGTACCTTTGGGGATGACTATTATTACAAAACAGTCGCCGAAGTCGGCACCGGAAAATACGAATTCCTTCAAGAACGAGTCTCCTTAAATGGCTCCACACCGGAGGAGAACGCAGTGAGAATGTTCGAGCACGTGGTGTTCTTGAACTGCAGCAATCCGGTGAGGGACGATCCACGATACGTGAACACTGCTCCTTGCATTAAAGAAGGCGGTAATAATGTTTATGCTGTGCTTGGAGACTTGGCGGTGGTTGAATTAAGAGATGATTGCCGTGTGAAGCTGATTGCAGCCTCATCGTTTCTTGTTCCACCGAGATTATATTATGATGATTCAGTGTTCATCGAGCAGAACTTGGCATACTCTGAAATCCATAAGAAACTCAGTTACGGATTTGAACTTTCGTGGATGTATGGGTTTGCTTGTGAAGATAAATGCGGGATGAAGAATTTTTGCGTATTCAACGAAATCACTCAGAACATCACCTGTGGGGATCCGGATAATCCCGTCTGTGATTACACTTCACTGCTGAACTACAAATGTGGAAACGTGTCAAAGCTACAAATAATTGCACAAGATTTTGCATACGGAATTTTGAAAGGACTTCGCAAAGTGTGGCACACGGATAGTGGTGAACACTTCTCTAAAAGAGATGTAATACCTGTTGTTAAGGTTGGATTATTCATGGGATTGTTTCTGATCTCATACATAATCCTCAAATACTCAATAGGTGTCATGTTTTTCTTTGCATTGTTGATCTACACGTTTCGAAGAAGGCATATATCAATCTATGAAAATATTGAGGATTTTCTACAAGGAAATACTCTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACCAGAGGTTTTAAGGAGAAGTTGGGAGAAGGAGGATTTGGTGCAGTGTACAAAGGAAAACTACAAAGTGGGCCTTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAAGCTAATGGCCAAGAATTTATCAGTGAAGTTGCTACCATTGGTAGAATACACCATGCAAATGTAGTAAGGTTGATTGGGTTTTGTGTGGAAGGTTCAAAACGCGCTCTTATATATGAATTCATGCCAAATGGTTCTTTAGATAAATATATATTTTCTAAAGAAACAAATGTATCTCTAACTTCGGAGAAGATGTTTGAGATATCCCTTGGTGTGGCACGCGGTATGGCTTATCTACATGAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCTCACAACATTCTTCTTGACGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAACTATATCCTCTTGATAATAGTATTGTGACTTTGACTGCGGCAAGAGGAACCATTGGTTACATGGCCCCAGAATTGTTCTATCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTGTATAGTTTTGGAATGCTTTTGATGGAAACAGCAAGTCAAAGAAGAAATTTAAATCCTCATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGCTGCTGAGGAAACTGATGAGATTGAGATGGAAACTTTTATGCATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCATTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCCCAAGTTGACTCATCAGGAGTAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAAGTACATCAAATCCCTTGTTAAAGTTTTCTGCTTGA 2214 0.4024 MSSRKGFCFSRLKLLLLIVTVAAAADHNRTCTPSACGKVTTITHPFRLRGDPASCGDRRYELSCENNITLLYLFPGKTYHVQAINYNNFTIRLLDPAISENDCSTLPRYSLSLTNFSTFGDDYYYKTVAEVGTGKYEFLQERVSLNGSTPEENAVRMFEHVVFLNCSNPVRDDPRYVNTAPCIKEGGNNVYAVLGDLAVVELRDDCRVKLIAASSFLVPPRLYYDDSVFIEQNLAYSEIHKKLSYGFELSWMYGFACEDKCGMKNFCVFNEITQNITCGDPDNPVCDYTSLLNYKCGNVSKLQIIAQDFAYGILKGLRKVWHTDSGEHFSKRDVIPVVKVGLFMGLFLISYIILKYSIGVMFFFALLIYTFRRRHISIYENIEDFLQGNTLMPIRYSYKEIKKMTRGFKEKLGEGGFGAVYKGKLQSGPFVAIKMLGKAKANGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALIYEFMPNGSLDKYIFSKETNVSLTSEKMFEISLGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMETASQRRNLNPHAEHSSQLYFPFWIYDQLAAEETDEIEMETFMHEERSELAKKMFIIALWCIQLKPSDRPSMNKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSQVDSSGVDASNNSYVSSSFEEESTSNPLLKFSA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04182 737 FunFam PR5-like receptor kinase 481 691 - -
Arst6g04182 737 Gene3D Transferase(Phosphotransferase) domain 1 481 694 - -
Arst6g04182 737 PANTHER RUST RESISTANCE KINASE LR10-RELATED 379 700 IPR045874 GO:0004672
Arst6g04182 737 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Arst6g04182 737 SUPERFAMILY Protein kinase-like (PK-like) 391 680 IPR011009 -
Arst6g04182 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Arst6g04182 737 MobiDBLite consensus disorder prediction 705 737 - -
Arst6g04182 737 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247
Arst6g04182 737 Pfam Protein tyrosine and serine/threonine kinase 408 679 IPR001245 GO:0004672|GO:0006468
Arst6g04182 737 FunFam serine/threonine-protein kinase PBS1-like 378 480 - -
Arst6g04182 737 SMART serkin_6 406 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04182 737 ProSiteProfiles Protein kinase domain profile. 406 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04182 737 Gene3D Phosphorylase Kinase; domain 1 383 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04182 Arst-Chr6 109860224 109863380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04182 14 693 Receptor kinase-like Gene Family AT5G38260 33.430 7.28e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04182 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04182 - - adu:110273082 928.702