Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04180 ATGGTAGCATTATTATTGGTGCTGCTGCTGAATTTGAATCTGGACATGGGAATTTACCATGATGATCCGGTTCCATGTCCCGTGCGTCTCTACTGTTCAGAAGACAAAACCAATATCCTTGAGCTGCCTGCCTTTCCATCCTCAGTAAAACTCCCCGTCACAAGCATTAGCTACACCTCAAACACTTTACAAGTATATGATCCCAAACACTGTTTTCCACAACTCTTTCTCACACTCAATTATTCATCATTTTATCCTTTCCAATCCATTAAACAATCACTTGAGTTCGATAGTTTTGATGATCCTCTACACCCAACAAACTGTACTTTCTTTGATTGCTCTTCAAGCGTGCCACCAAACATCCTCAGCGGCTACTACGAGGAACAAGATCTGTTATCTTGCCCGATTCTTATTGCTTTAGATGACGACAACATCATCGAATCCAACCTTGTATTGTGCACAAAATTGACTCGTCATGTCTTGCCAATTTCCGTATGTAAGATACAGTGGAATTGGGAACCATTATACTTGGTATGGTCGACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAATGGTACTGAACACCATGAATCCGTTCTTTTACCCCTTACAGGTGCAACTCTCCTTGTGCTAATACTGGGTGTCATGTATCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAACAAAGAATTGAAACTTTTTTGAAGGACTACAAAGCATTAAACCCAACAAGATTCTCTTATACTGATATGAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTAACTAATCAAATTCTGGTTGCCGTCAAGATTCTCAATAAAGCAGATGGAGATGGGACAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTCCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTGCAGAGCTTCATTGCTCTGTCAAGCGACAAAGAAACCTTCTTTGGATGGAACAAGATGCATCAGATTGCTGTAGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTGACCAAAGAATTCTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATCAAAATTTCACTCCTAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAGAATCGAAGCACTGTGTCCATGACAGCAGCAAGGGGAACGTTAGGATACATGGCGCCTGAAGTTTTTTCTAGAAACTTCGGTAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGTTGTTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCGAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCTATCGACGATGATGGAGATTTTAGAATTGCAAAGAAGCTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGCAGAGGAAGATAAGTTGAAAGTGCCTCCGAATCCTTTTGAATCTATAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAAATTCTTGAATTTGGAATTGGAAGTAATTCCAGAAACAGACTAG 1728 0.4045 MVALLLVLLLNLNLDMGIYHDDPVPCPVRLYCSEDKTNILELPAFPSSVKLPVTSISYTSNTLQVYDPKHCFPQLFLTLNYSSFYPFQSIKQSLEFDSFDDPLHPTNCTFFDCSSSVPPNILSGYYEEQDLLSCPILIALDDDNIIESNLVLCTKLTRHVLPISVCKIQWNWEPLYLVWSTETFKSGCFVACNVSNNGTEHHESVLLPLTGATLLVLILGVMYHIYCYYRNKGEDQQRIETFLKDYKALNPTRFSYTDMKRITKQFKDKLGEGAHGAVYKGKLTNQILVAVKILNKADGDGTEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIALSSDKETFFGWNKMHQIAVGIAKGIEYLHQGCDQRILHFDINPRNVLLDQNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEAEEDKLKVPPNPFESIAATSSSAIIPAKFLNLELEVIPETD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04180 575 ProSiteProfiles Protein kinase domain profile. 264 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04180 575 Pfam Protein tyrosine and serine/threonine kinase 266 533 IPR001245 GO:0004672|GO:0006468
Arst6g04180 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 235 551 IPR045874 GO:0004672
Arst6g04180 575 SUPERFAMILY Protein kinase-like (PK-like) 244 534 IPR011009 -
Arst6g04180 575 FunFam serine/threonine-protein kinase PBS1-like 232 338 - -
Arst6g04180 575 Gene3D Phosphorylase Kinase; domain 1 238 338 - -
Arst6g04180 575 Gene3D Transferase(Phosphotransferase) domain 1 339 545 - -
Arst6g04180 575 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Arst6g04180 575 FunFam PR5-like receptor kinase 339 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04180 Arst-Chr6 109854133 109855939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04180 244 546 Receptor kinase-like Gene Family AT1G66910 48.232 5.36e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04180 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04180 - - adu:107495716 938.332