Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04179 ATGAGCAGAGGGAAAGGCTTGTGGTGTTCACTACTACTCTTAAAGTTGCTCTTTCAAACTTGTTGCAATGGAGGAGCATGTAGGCCTTCCTCTTGCGGCAAAATCACCAACATAAAACATCCTTTCCGGCTCAAGGATGATCCCGCAAGCTGTGGGGATTCCAGGTACGAGTTGTCTTGTGAGAATAACAGGACGCTGTTATATCTTTTCCCCGGTATAAGCTACCATGTGCAGGCAATAAACTACAATAACTTCACAATCCGGCTTGTAGATCCCGCCATTTCAGACTCAGGGGATGACTGCTCCACCCTTCCCCGATATTCTTTGTCCGCTAGAAATTTCAGTGACAGCTATGGCTACATGGATATCCCCAAATACAGTGAACCATATGGAACTATTCAAGAACGAACTCATTATGATGTAGTAAGAATGTTCGAGAACGTGATCTTTTTGAACTGCAGCTATCCGATCAGGGATGATCCACGATTCGTGGATGCTGCTCCTTGCGTTAAAGAAGGAGGCAATGTTTATGCTGTTCTTGGAGACATGGACGTGGGTGAATTAAGAGATGAGTGCCGTGTGAAGATGGTTGCTGCCTCATCCTTTCTTGTTCCACCGAGATCGTGGGAGGATTCATTCTTCATCTACCAAAACTTGTCATACGCTGAAATTCATAGAAAACTCGCTTACGGATTTCATCTTTCTTGGATGATCGGCGGTGCTTGTTCATCTGCCTGTGGCCAGCTGAGTTCTTGCTTCTTCAACGAAACCTCTCCAAATCTCATCACTTGCCGAGCGGATCGCTGTTTCACTCCAATAACGTTCAATGAATGCCATTTTGCATATGGATTTTTGACAGGATTTAACAACAAAGTGATTGTCAGAGATACCGGAGAAAAAATTTCTGGAAAAAAAAATGTAGTAGCTGCTATTAAGGTAGGTGCATTCACAGGACGGTTTCTAGTGCCATACATGATCGTCAAATATGCATTAGGTGTTCTGTTTTTCTTTGCACTGTTGATCTACACATATCAAAAAAGACATATATCAATCTATGAGAATATTGAAGGTTTTCTACAAAAAAATACCCTCATGCCAATAAGGTATTCATATAAAAAAATAAAGAAGATGACATCAGGTTTTAAGGAAAAGTTGGGAGAAGGAGGATTCGGCTCAGTCTACAAAGGACGGTTAATAAGTGGTCCCTTTGTAGCCATAAAAATGTTAGGTAAAGCAAAGGGAAATGGCCAAGAATTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCTAATGTGGTGAGGTTGATTGGATTCTGTGTCGAGGGTTCAAAACGCGCTCTTGTATATGAATTTATGCCGAATGGTTCTCTAGATAAGTTTATTTTTTCTAAAGTGGATAGTGTATCATTGACTTACCAGAAACTTTTTGAAATATCTCTTGGTGTGGCTCGTGGTATAGCTTATCTGCACGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGACGAGAACTTCATTCCTAAAGTGTCAGATTTTGGTCTTGCAAAGCTTAATCCTCTTGATAACAGTATTGTAACTTTGACAGCAGTAAGAGGAACAATTGGTTACATGGCTCCGGAATTGTTCTACAAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTCGAATCCAAATGCAGAGCATTCGAGCCAATTTTACTTTCCATTTTGGATATACGATCAATTGGCTCGGAAAAATGATGAGATAGAGATGGAAACTTTGATACATGAAGAAACGAGTGAACTAGCAAAAAAGATTTTCATAACTGCACTGTGGTGTATACAATTAAAACCAAGTGATCGTCCTTCAATGAATAAAGTAGTGAAAATGTTAGAAGGGGATGTTGCAAGCATTGAAATGCCTCCAAGGCCTTCATATTATCCAAATGATATGATTCACAGGGATTCTGAGATTAATTCAGGAGTAACTACTTTAAATAACTCTTCAGGCTCTTCAGGTTTTGATGAGGAGGAAATTACAACCAATCGTATGTGA 2115 0.3967 MSRGKGLWCSLLLLKLLFQTCCNGGACRPSSCGKITNIKHPFRLKDDPASCGDSRYELSCENNRTLLYLFPGISYHVQAINYNNFTIRLVDPAISDSGDDCSTLPRYSLSARNFSDSYGYMDIPKYSEPYGTIQERTHYDVVRMFENVIFLNCSYPIRDDPRFVDAAPCVKEGGNVYAVLGDMDVGELRDECRVKMVAASSFLVPPRSWEDSFFIYQNLSYAEIHRKLAYGFHLSWMIGGACSSACGQLSSCFFNETSPNLITCRADRCFTPITFNECHFAYGFLTGFNNKVIVRDTGEKISGKKNVVAAIKVGAFTGRFLVPYMIVKYALGVLFFFALLIYTYQKRHISIYENIEGFLQKNTLMPIRYSYKKIKKMTSGFKEKLGEGGFGSVYKGRLISGPFVAIKMLGKAKGNGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDSVSLTYQKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVTLTAVRGTIGYMAPELFYKNIGAVSYKADVYSFGMLLMEMASQRRNSNPNAEHSSQFYFPFWIYDQLARKNDEIEMETLIHEETSELAKKIFITALWCIQLKPSDRPSMNKVVKMLEGDVASIEMPPRPSYYPNDMIHRDSEINSGVTTLNNSSGSSGFDEEEITTNRM 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04179 704 Gene3D Transferase(Phosphotransferase) domain 1 454 659 - -
Arst6g04179 704 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Arst6g04179 704 PANTHER RUST RESISTANCE KINASE LR10-RELATED 352 671 IPR045874 GO:0004672
Arst6g04179 704 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Arst6g04179 704 MobiDBLite consensus disorder prediction 683 697 - -
Arst6g04179 704 Gene3D Phosphorylase Kinase; domain 1 356 453 - -
Arst6g04179 704 ProSiteProfiles Protein kinase domain profile. 379 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04179 704 CDD STKc_IRAK 385 653 - -
Arst6g04179 704 SUPERFAMILY Protein kinase-like (PK-like) 364 652 IPR011009 -
Arst6g04179 704 Pfam Protein tyrosine and serine/threonine kinase 381 651 IPR001245 GO:0004672|GO:0006468
Arst6g04179 704 FunFam serine/threonine-protein kinase PBS1-like 350 453 - -
Arst6g04179 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Arst6g04179 704 MobiDBLite consensus disorder prediction 683 704 - -
Arst6g04179 704 SMART serkin_6 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04179 704 FunFam PR5-like receptor kinase 454 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04179 Arst-Chr6 109848847 109852848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04179 27 667 Receptor kinase-like Gene Family AT5G38260 34.703 1.17e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04179 PK_Tyr_Ser-Thr 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04179 - - adu:110273082 925.62