Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04178 ATGATGAGCAGACGAAAAGCCCTCTTCTGCTCATCACTACTCTTATTGCAACAAATTTTAACTTGCGCAGCGAATCAGAAGGGTAACGGAGAAGCATGTAGGCCTTCCTCTTGCGGCAAAATCAGCAACGTAAAACATCCTTTCCGGCTGAAGGATGATCCTGCAACCTGTGGGGATCCGAGCAACTTCACGATCCGGCTTGTAGATCCCGGCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCGTTCCAATTTCAGTGACAGTTACGTACCCTACTTCCTGCTCTCCAAAGGCGTCAATGAACCATACGGAACCCTTCAAGATCGAGTTTTTGTTAATGGCTCGACAACGGAGGAAGTCGGAATAAGAGTATTCGAGCACGTGATTTTCTTGAACTGCAGCAATCCGATCAAGGACGATCCACGATTCGTGGACACTGCCCCTTGCATTGAAAAAGGTGATCATCATGTTTATGCTGTCGTTGGAGGATTGAAGGCGGTTGAATTAAGAGATGATTGCCGTGTGAAGATGGTTGCTGCCTCATCCTTTCTTGCTCCCGCACAGCGAAACTTGTCATACGGTGAAATTCATAGGAGGCTCAGCTACGGGTTTGATCTTTCTTGGATGCTGGGCGGTGCTTGTGCATCTACTTGTGGGAAGCTCAATCTTTGCTCATTCAACGAAACCGCTCAACGACTCATTTGCACGGATGGCTGTGGCAGTCCAACGGGAGTCCAATGCAGAAAAATTTCAAAGCTCCAAATCATTGGAAAAGATTTTGCATATGGAATTTTGAAAGGATTTCGCAAAGTGGTAGGCAAAGATACTGGTGAAAATTTCTCTAAAATGGATGTGTTAGCTGTTATTAAGATAGGAGTATTCACAGGAAGATTTCTAGTGCCTTACATACTCGTCAAACACACATTGGGTGTCATATTTTTTTCTGCACTTCTGATCTACACATTCCGAAGAAGACATATATCAATTTATGGGAACATTGAAGATTTTTTGCAAGGAAACACCTTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACAAGAGGTTTCAAGGAAAAGTTGGGAGAAGGAGGATTTGGTACAGTGTACAAAGGAAAGTTAATAAGCGGGCCTTTTGTAGCCGTAAAAATGTTGGGTAAAGCCAATGGTAACGGGCAAGATTTTATTAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTGGTGAGGCTGATTGGTTTTAATGTCGAGAGATCAAAACATGCTCTGGTATATGAATTCATGCCGAATGGTTCTTTGGATAAATATATCTTCTCTAAAGAGGATAGAATATCTTTAACATATCAGAAGATGTTTGAGATAGCTCTAGGAGTAGCTCGTGGTATGGCTTATTTGCATGAAGGTTGTGACATGCAGATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCTGACTTTGGTCTCGCAAAACTATATCCTCTTGATAATAGTATTGTAACTTTGACTGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAACTGTTCTACCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATAGCAAGTCAAAGAAGAAATTCGAATCCACATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGTTGCTGAGGAAAATGATGAGATTGAGATGGAAACTTTGATGGATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCGTTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAGTAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCGGAAGTTGACTCATCAGGAATAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAATACATCCAATCCCTTGTTAA 2067 0.4059 MMSRRKALFCSSLLLLQQILTCAANQKGNGEACRPSSCGKISNVKHPFRLKDDPATCGDPSNFTIRLVDPGISENDCSTLPRYSLSRSNFSDSYVPYFLLSKGVNEPYGTLQDRVFVNGSTTEEVGIRVFEHVIFLNCSNPIKDDPRFVDTAPCIEKGDHHVYAVVGGLKAVELRDDCRVKMVAASSFLAPAQRNLSYGEIHRRLSYGFDLSWMLGGACASTCGKLNLCSFNETAQRLICTDGCGSPTGVQCRKISKLQIIGKDFAYGILKGFRKVVGKDTGENFSKMDVLAVIKIGVFTGRFLVPYILVKHTLGVIFFSALLIYTFRRRHISIYGNIEDFLQGNTFMPIRYSYKEIKKMTRGFKEKLGEGGFGTVYKGKLISGPFVAVKMLGKANGNGQDFISEVATIGRIHHANVVRLIGFNVERSKHALVYEFMPNGSLDKYIFSKEDRISLTYQKMFEIALGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEIASQRRNSNPHAEHSSQLYFPFWIYDQLVAEENDEIEMETLMDEERSELAKKMFIIALWCIQLKPSDRPSMSKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSEVDSSGIDASNNSYVSSSFEEEIHPIPC 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04178 688 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04178 688 Pfam Protein tyrosine and serine/threonine kinase 364 635 IPR001245 GO:0004672|GO:0006468
Arst6g04178 688 PANTHER RUST RESISTANCE KINASE LR10-RELATED 333 656 IPR045874 GO:0004672
Arst6g04178 688 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Arst6g04178 688 FunFam PR5-like receptor kinase 437 647 - -
Arst6g04178 688 SMART serkin_6 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04178 688 FunFam serine/threonine-protein kinase PBS1-like 336 436 - -
Arst6g04178 688 Gene3D Phosphorylase Kinase; domain 1 341 436 - -
Arst6g04178 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Arst6g04178 688 SUPERFAMILY Protein kinase-like (PK-like) 347 636 IPR011009 -
Arst6g04178 688 Gene3D Transferase(Phosphotransferase) domain 1 437 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04178 Arst-Chr6 109839042 109845909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04178 13 649 Receptor kinase-like Gene Family AT5G38260 34.333 3.70e-102 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04178 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04178 - - adu:110273082 843.188