Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04177 ATGATGAGCAGACGAAAAGCCCTCTTCTGCTCATCACTACTCTTATTGCAACAAATTTTAACTTGCGCAGCGAATCAGAAGGGTAACGGAGAAGCATGTAGGCCTTCCTCTTGCGGCAAAATCAGCAACGTAAAACATCCTTTCCGGCTGAAGGATGATCCTGCAACCTGTGGGGATCCGAGGTATGAGTTGTCTTGTGAGAATAACAGGACGCTGTTATATCTTTTTCCCGGTAAAACTTACCAAGTTGAGGCAATAAACTACAGCAACTTCACGATCCGGCTTGTAGATCCCGGCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCGTTCCAATTTCAGTGACAGTTACGTACCCTACTTCCTGCTCTCCAAAGGCGTCAATGAACCATACGGAACCCTTCAAGATCGAGTTTTTGTTAATGGCTCGACAACGGAGGAAGTCGGAATAAGAGTATTCGAGCACGTGATTTTCTTGAACTGCAGCAATCCGATCAAGGACGATCCACGATTCGTGGACACTGCCCCTTGCATTGAAAAAGGTGATCATCATGTTTATGCTGTCGTTGGAGGATTGAAGGCGGTTGAATTAAGAGATGATTGCCGTGTGAAGATGGTTGCTGCCTCATCCTTTCTTGCTCCCGCACAGCGAAACTTGTCATACGGTGAAATTCATAGGAGGCTCAGCTACGGGTTTGATCTTTCTTGGATGCTGGGCGGTGCTTGTGCATCTACTTGTGGGAAGCTCAATCTTTGCTCATTCAACGAAACCGCTCAACGACTCATTTGCACGGATGGCTGTGGCAGTCCAACGGGAGTCCAATGCAGAAAAATTTCAAAGCTCCAAATCATTGGAAAAGATTTTGCATATGGAATTTTGAAAGGATTTCGCAAAGTGGTAGGCAAAGATACTGGTGAAAATTTCTCTAAAATGGATGTGTTAGCTGTTATTAAGATAGGAGTATTCACAGGAAGATTTCTAGTGCCTTACATACTCGTCAAACACACATTGGGTGTCATATTTTTTTCTGCACTTCTGATCTACACATTCCGAAGAAGACATATATCAATTTATGGGAACATTGAAGATTTTTTGCAAGGAAACACCTTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACAAGAGGTTTCAAGGAAAAGTTGGGAGAAGGAGGATTTGGTACAGTGTACAAAGGAAAGTTAATAAGCGGGCCTTTTGTAGCCGTAAAAATGTTGGGTAAAGCCAATGGTAACGGGCAAGATTTTATTAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTGGTGAGGCTGATTGGTTTTAATGTCGAGAGATCAAAACATGCTCTGGTATATGAATTCATGCCGAATGGTTCTTTGGATAAATATATCTTCTCTAAAGAGGATAGAATATCTTTAACATATCAGAAGATGTTTGAGATAGCTCTAGGAGTAGCTCGTGGTATGGCTTATTTGCATGAAGGTTGTGACATGCAGATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCTGACTTTGGTCTCGCAAAACTATATCCTCTTGATAATAGTATTGTAACTTTGACTGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAACTGTTCTACCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATAGCAAGTCAAAGAAGAAATTCGAATCCACATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGTTGCTGAGGAAAATGATGAGATTGAGATGGAAACTTTGATGGATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCGTTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAGTAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCGGAAGTTGACTCATCAGGAATAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAATACATCCAATCCCTTGTTAA 2151 0.4049 MMSRRKALFCSSLLLLQQILTCAANQKGNGEACRPSSCGKISNVKHPFRLKDDPATCGDPRYELSCENNRTLLYLFPGKTYQVEAINYSNFTIRLVDPGISENDCSTLPRYSLSRSNFSDSYVPYFLLSKGVNEPYGTLQDRVFVNGSTTEEVGIRVFEHVIFLNCSNPIKDDPRFVDTAPCIEKGDHHVYAVVGGLKAVELRDDCRVKMVAASSFLAPAQRNLSYGEIHRRLSYGFDLSWMLGGACASTCGKLNLCSFNETAQRLICTDGCGSPTGVQCRKISKLQIIGKDFAYGILKGFRKVVGKDTGENFSKMDVLAVIKIGVFTGRFLVPYILVKHTLGVIFFSALLIYTFRRRHISIYGNIEDFLQGNTFMPIRYSYKEIKKMTRGFKEKLGEGGFGTVYKGKLISGPFVAVKMLGKANGNGQDFISEVATIGRIHHANVVRLIGFNVERSKHALVYEFMPNGSLDKYIFSKEDRISLTYQKMFEIALGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEIASQRRNSNPHAEHSSQLYFPFWIYDQLVAEENDEIEMETLMDEERSELAKKMFIIALWCIQLKPSDRPSMSKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSEVDSSGIDASNNSYVSSSFEEEIHPIPC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04177 716 SUPERFAMILY Protein kinase-like (PK-like) 375 664 IPR011009 -
Arst6g04177 716 Gene3D Phosphorylase Kinase; domain 1 369 464 - -
Arst6g04177 716 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Arst6g04177 716 SMART serkin_6 390 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04177 716 FunFam serine/threonine-protein kinase PBS1-like 364 464 - -
Arst6g04177 716 Gene3D Transferase(Phosphotransferase) domain 1 465 672 - -
Arst6g04177 716 FunFam PR5-like receptor kinase 465 675 - -
Arst6g04177 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Arst6g04177 716 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247
Arst6g04177 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 361 684 IPR045874 GO:0004672
Arst6g04177 716 ProSiteProfiles Protein kinase domain profile. 390 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04177 716 Pfam Protein tyrosine and serine/threonine kinase 392 663 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04177 Arst-Chr6 109839042 109845909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04177 13 677 Receptor kinase-like Gene Family AT5G38260 33.480 2.65e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04177 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04177 - - adu:110273082 902.508