Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04175 ATGCCAAGTTTCGCATATCTGATACAGGAGGGACATAATTCAATCAACTTGGTATCGAAGACAAGTTTCCAGAGTGGCCATGGATGCTTTGTTGCTTGCAACATATCCAAGCAAGAGTCTGAATTGGAGACTCCTAATGAAGGGAAGCCTAAAACAGGGAAGGAGTATGAATCCATAATTTTACCGATTGCAGGTGCATCTCTCCTTTTCTCAATACTGGGTGCCTCGTATCATGTATATCATTATTATAGGAAAAGAGGGGAAGATCAAGAAAGAGTTGAAACTTTTTTGAAGGACTACGAGGCATTAAACCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCACGGAGCCGTCTACAAAGGTAAATTGTCCAGTCAAATTCTAGTTGCCGTCAAGATTCTCAATAGCACAGTGGGAGAAGGAAAAGAATTCATAAACGAAGTGGGAACAATGTCCAAAGTTCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATAGCTACGTCAAGCGACAAGGAAACCTTCCTTGGATGGAACAAGTTGCATCACATTGCTCTCGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATGATAATTTCACTCCAAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAAAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACCTTAGGCTACATGGCGCCTGAAGTTTTCTCTAGAAATTTCGGCAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGCTATTACTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCAAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCTATCGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGCAGAGGAAGACGAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAGATTCTTGAATATGGAATTGGAAGTGATTCCAGAAGCAGACTAG 1290 0.4124 MPSFAYLIQEGHNSINLVSKTSFQSGHGCFVACNISKQESELETPNEGKPKTGKEYESIILPIAGASLLFSILGASYHVYHYYRKRGEDQERVETFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSSQILVAVKILNSTVGEGKEFINEVGTMSKVHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIATSSDKETFLGWNKLHHIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDDNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEAEEDELKVPPNPFESAAATSSSAIIPARFLNMELEVIPEAD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04175 429 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Arst6g04175 429 PANTHER RUST RESISTANCE KINASE LR10-RELATED 90 405 IPR045874 GO:0004672
Arst6g04175 429 FunFam PR5-like receptor kinase 193 399 - -
Arst6g04175 429 Gene3D Transferase(Phosphotransferase) domain 1 193 399 - -
Arst6g04175 429 FunFam serine/threonine-protein kinase PBS1-like 86 192 - -
Arst6g04175 429 Pfam Protein tyrosine and serine/threonine kinase 120 387 IPR001245 GO:0004672|GO:0006468
Arst6g04175 429 SUPERFAMILY Protein kinase-like (PK-like) 98 388 IPR011009 -
Arst6g04175 429 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04175 429 Gene3D Phosphorylase Kinase; domain 1 91 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04175 Arst-Chr6 109823408 109825304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04175 84 400 Receptor kinase-like Gene Family AT1G66910 48.615 1.20e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04175 PK_Tyr_Ser-Thr 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04175 - - adu:107495715 864.374