Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04174 ATGAAAACAGGCTCACTCTTAAACTACTTGCTCCTAATTACCACTGTTGCCTCCGCCGCCATGGATGCTAACACAACATGTGCCCCATCTTCGTGCGGCAAAGTCACCAACATAAGTCATCCTTTCCGGCTGAAGGATGACCCACAAAATTGTGGCGATGAGAGGTATGAGTTGGCTTGCGAGAATAACATCGCCGTGCTAGCTTTGTTCCCAGGGAAGAACTACCATGTTGAATCAATAAACTACAATAACTTCACAATCCGACTCGTAGATCCCGGCATCTCAGAGGATGATTGCTCCACCCTTCCTCACTATTCCATAACCAGATCCTATTTGAGGAATGAAGATGAAAGCAGACCATATGAAGACAGTCAATACCGACAGACTGATTTTCGTAATGGCTCCACACAAGTCGAAACTGTAGAATTAGACTATAACGTGGTTTTCTTGGAGTGCAGAAATCCGGTGAGGGACGATCCACGATATGTGGACACTGCCTCTTGCATTCAACAAGGCCATCATGTTTATGCCGTTGTTGGAGGGTTGACGGTGGTTGAATTAAGAGATGGTTGCCATGTGAAGCTGGTTGCTCCCTGCTCATCATCCTTTCTTGCTCCACCGAGATGGCCAAAGTACGAATCATTATTGAGCTGCAACCAAAACTATTCATACGCTGAGATTCATAGGATGCTCAATTATGGATTTGAGCTTTCGTGGGTACCTGGTGCTTGTGAATATAAGTGTGGACTGAAGGGGAGTTCTTGCGCAATCGACCAAACCGCTCAAAGTAGTCTCATATGTTCGGAGGATTGTTACACACCACCTTTTGGGAAAGAATGTCGAATGGTGTCGAAGCTCCAAATAATCGCAGAAGATTCCGCGTATGGAATTTTGAAAGGACTTCGGAAAGTAGTAGGAAAAGATGGTGGCGATTCTTTCTCTAAAGAGGATGTATTACCTATAATTGATGTAGGAGTATTCACGGGATGGTTTATGGTGCCATACATGGTCGTCAAATACATATTGAGTCTCATACTTTTCTTTGTAATGCTGATCTACACATGCCAAAGAAAACATGCATCAATTTATGAAAACATTGAGGAATTTTTGCAAGGGAGCAATCTCATTCCAATAAGGTATTCATATAAAGAGATAAAGAAAATGACAAGAGATTTTAAAGAAAAATTGGGAGAAGGAGGATTCGGTTCCGTGTACAAGGGAAAGCTACGAAGTGGACCTTTTGTAGCCATAAAAATGTTGGGTAAAGCTAAGGCTAATGGTCAAGAATTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATATAGTAAGGTTGATTGGATTTTGTGTTGAGGGTTCAAAACGTGCTCTTGTATACGAATTTATGCCGAATGGTTCTCTAGATAAGTTTATTTTCTCCAAAGTGGATAGTGTATCATTGACTTGCCAGGAACTTTTTGAAATATCTCTTGGAGTGGCTCGTGGCATAGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAATATTCTTCTTGACGAAAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAACTGAATCCTCTTGATAATAGTATTGTAACTTTGACAGCAGCACGAGGAACAATTGGTTACATGGCTCCAGAATTGTTCTACCAAAATATTGGAGCAGTATCTTATAAGGCCGATGTCTATAGCTTTGGAATGCTTTTGATGGAGATGGCAAGTCAAAGAAGAAACTGCAACCCAAATGCAGAGCATTCGAGTCAATTTTACTTTCCATTTTGGATATACAATCAATTGACTCAGAAAAATGATGAAATAGAGATGGAAATTTTAATGCATGAAGAAACAAGCGAAGTAGCAAAAAGGATGTTCTTAACCGCACTATGGTGTATACAATTAAAGCCAAGTGATCGTCCTTCAATGAATAAAGTGGTGAAAATGTTAGAAGGGAATGCTGCAAGCATTGAAATGCCTCCAAGACCTTCATATTATCCAAATGATACGATTCACAAAGATTCTGAGATTAATTCAGGAGTAACTATTTCAGATGATTCTTCTAGTTGTTCAGGTTTTGAGGAGGAAATTACAACCAATCCTATGTGA 2145 0.4023 MKTGSLLNYLLLITTVASAAMDANTTCAPSSCGKVTNISHPFRLKDDPQNCGDERYELACENNIAVLALFPGKNYHVESINYNNFTIRLVDPGISEDDCSTLPHYSITRSYLRNEDESRPYEDSQYRQTDFRNGSTQVETVELDYNVVFLECRNPVRDDPRYVDTASCIQQGHHVYAVVGGLTVVELRDGCHVKLVAPCSSSFLAPPRWPKYESLLSCNQNYSYAEIHRMLNYGFELSWVPGACEYKCGLKGSSCAIDQTAQSSLICSEDCYTPPFGKECRMVSKLQIIAEDSAYGILKGLRKVVGKDGGDSFSKEDVLPIIDVGVFTGWFMVPYMVVKYILSLILFFVMLIYTCQRKHASIYENIEEFLQGSNLIPIRYSYKEIKKMTRDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKANGQEFISEVATIGRIHHANIVRLIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDSVSLTCQELFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEMASQRRNCNPNAEHSSQFYFPFWIYNQLTQKNDEIEMEILMHEETSEVAKRMFLTALWCIQLKPSDRPSMNKVVKMLEGNAASIEMPPRPSYYPNDTIHKDSEINSGVTISDDSSSCSGFEEEITTNPM 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04174 714 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Arst6g04174 714 CDD STKc_IRAK 396 664 - -
Arst6g04174 714 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Arst6g04174 714 FunFam serine/threonine-protein kinase PBS1-like 359 464 - -
Arst6g04174 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 363 683 IPR045874 GO:0004672
Arst6g04174 714 MobiDBLite consensus disorder prediction 692 714 - -
Arst6g04174 714 Coils Coil 610 630 - -
Arst6g04174 714 SUPERFAMILY Protein kinase-like (PK-like) 376 663 IPR011009 -
Arst6g04174 714 Pfam Protein kinase domain 392 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04174 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Arst6g04174 714 Gene3D Transferase(Phosphotransferase) domain 1 465 672 - -
Arst6g04174 714 SMART serkin_6 390 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04174 714 FunFam PR5-like receptor kinase 465 673 - -
Arst6g04174 714 Gene3D Phosphorylase Kinase; domain 1 368 464 - -
Arst6g04174 714 ProSiteProfiles Protein kinase domain profile. 390 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04174 Arst-Chr6 109813303 109823032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04174 5 678 Receptor kinase-like Gene Family AT5G38260 34.808 2.74e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04174 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04174 - - adu:110273082 1024.62