Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04173 ATGAAAACAGGCTCACTCTTAAACTACTTGCTCCTAATTACCACTGTTGCCTCCGCCGCCATGGATGCTAACACAACATGTGCCCCATCTTCGTGCGGCAAAGTCACCAACATAAGTCATCCTTTCCGGCTGAAGGATGACCCACAAAATTGTGGCGATGAGAGGTATGAGTTGGCTTGCGAGAATAACATCGCCGTGCTAGCTTTGTTCCCAGGGAAGAACTACCATGTTGAATCAATAAACTACAATAACTTCACAATCCGACTCGTAGATCCCGGCATCTCAGAGGATGATTGCTCCACCCTTCCTCACTATTCCATAACCAGATCCTATTTGAGGAATGAAGATGAAAGCAGACCATATGAAGACAGTCAATACCGACAGACTGATTTTCGTAATGGCTCCACACAAGTCGAAACTGTAGAATTAGACTATAACGTGGTTTTCTTGGAGTGCAGAAATCCGGTGAGGGACGATCCACGATATGTGGACACTGCCTCTTGCATTCAACAAGGCCATCATGTTTATGCCGTTGTTGGAGGGTTGACGGTGGTTGAATTAAGAGATGGTTGCCATGTGAAGCTGGTTGCTCCCTGCTCATCATCCTTTCTTGCTCCACCGAGATGGCCAAAGTACGAATCATTATTGAGCTGCAACCAAAACTATTCATACGCTGAGATTCATAGGATGCTCAATTATGGATTTGAGCTTTCGTGGGTACCTGGTGCTTGTGAATATAAGTGTGGACTGAAGGGGAGTTCTTGCGCAATCGACCAAACCGCTCAAAGTAGTCTCATATGTTCGGAGGATTGTTACACACCACCTTTTGGGAAAGAATGTCGAATGGTGTCGAAGCTCCAAATAATCGCAGAAGGACTTCGGAAAGTAGTAGGAAAAGATGGTGGCGATTCTTTCTCTAAAGAGGATGTATTACCTATAATTGATGTAGGAGTATTCACGGGATGGTTTATGGTGCCATACATGGTCGTCAAATACATATTGAGTCTCATACTTTTCTTTGTAATGCTGATCTACACATGCCAAAGAAAACATGCATCAATTTATGAAAACATTGAGGAATTTTTGCAAGGGAGCAATCTCATTCCAATAAGGTATTCATATAAAGAGATAAAGAAAATGACAAGAGATTTTAAAGAAAAATTGGGAGAAGGAGGATTCGGTTCCGTGTACAAGGGAAAGCTACGAAGTGGACCTTTTGTAGCCATAAAAATGTTGGGTAAAGCTAAGGCTAATGGTCAAGAATTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATATAGTAAGGTTGATTGGATTTTGTGTTGAGGGTTCAAAACGTGCTCTTGTATACGAATTTATGCCGAATGGTTCTCTAGATAAGTTTATTTTCTCCAAAGTGGATAGTGTATCATTGACTTGCCAGGAACTTTTTGAAATATCTCTTGGAGTGGCTCGTGGCATAGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAATATTCTTCTTGACGAAAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAACTGAATCCTCTTGATAATAGTATTGTAACTTTGACAGCAGCACGAGGAACAATTGGTTACATGGCTCCAGAATTGTTCTACCAAAATATTGGAGCAGTATCTTATAAGGCCGATGTCTATAGCTTTGGAATGCTTTTGATGGAGATGGCAAGTCAAAGAAGAAACTGCAACCCAAATGCAGAGCATTCGAGTCAATTTTACTTTCCATTTTGGATATACAATCAATTGACTCAGAAAAATGATGAAATAGAGATGGAAATTTTAATGCATGAAGAAACAAGCGAAGTAGCAAAAAGGATGTTCTTAACCGCACTATGGTGTATACAATTAAAGCCAAGTGATCGTCCTTCAATGAATAAAGTGGTGAAAATGTTAGAAGGGAATGCTGCAAGCATTGAAATGCCTCCAAGACCTTCATATTATCCAAATGATACGATTCACAAAGATTCTGAGATTAATTCAGGAGTAACTATTTCAGATGATTCTTCTAGTTGTTCAGGTTTTGAGGAGGAAATTACAACCAATCCTATGTGA 2121 0.4026 MKTGSLLNYLLLITTVASAAMDANTTCAPSSCGKVTNISHPFRLKDDPQNCGDERYELACENNIAVLALFPGKNYHVESINYNNFTIRLVDPGISEDDCSTLPHYSITRSYLRNEDESRPYEDSQYRQTDFRNGSTQVETVELDYNVVFLECRNPVRDDPRYVDTASCIQQGHHVYAVVGGLTVVELRDGCHVKLVAPCSSSFLAPPRWPKYESLLSCNQNYSYAEIHRMLNYGFELSWVPGACEYKCGLKGSSCAIDQTAQSSLICSEDCYTPPFGKECRMVSKLQIIAEGLRKVVGKDGGDSFSKEDVLPIIDVGVFTGWFMVPYMVVKYILSLILFFVMLIYTCQRKHASIYENIEEFLQGSNLIPIRYSYKEIKKMTRDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKANGQEFISEVATIGRIHHANIVRLIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDSVSLTCQELFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEMASQRRNCNPNAEHSSQFYFPFWIYNQLTQKNDEIEMEILMHEETSEVAKRMFLTALWCIQLKPSDRPSMNKVVKMLEGNAASIEMPPRPSYYPNDTIHKDSEINSGVTISDDSSSCSGFEEEITTNPM 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04173 706 Gene3D Transferase(Phosphotransferase) domain 1 457 664 - -
Arst6g04173 706 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Arst6g04173 706 SMART serkin_6 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04173 706 SUPERFAMILY Protein kinase-like (PK-like) 368 655 IPR011009 -
Arst6g04173 706 CDD STKc_IRAK 388 656 - -
Arst6g04173 706 ProSiteProfiles Protein kinase domain profile. 382 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04173 706 FunFam serine/threonine-protein kinase PBS1-like 351 456 - -
Arst6g04173 706 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Arst6g04173 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Arst6g04173 706 Gene3D Phosphorylase Kinase; domain 1 360 456 - -
Arst6g04173 706 MobiDBLite consensus disorder prediction 684 706 - -
Arst6g04173 706 FunFam PR5-like receptor kinase 457 665 - -
Arst6g04173 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 355 675 IPR045874 GO:0004672
Arst6g04173 706 Coils Coil 602 622 - -
Arst6g04173 706 Pfam Protein kinase domain 384 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04173 Arst-Chr6 109813303 109823032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04173 5 670 Receptor kinase-like Gene Family AT5G38260 35.224 1.53e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04173 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04173 - - adu:110273082 1027.7