Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04171 ATGACATTAGCATTTCTAGAAGGGAATCCCAGCGTTAACAAGTGCAAAGACAATTTTGTCCTCACAGTTCTCAACAAAGGAAGGAAAGCCTTCTCCATCTCCTACTTCTGCTGCTTCCTCTTACACTTTCTTCTAACAATTACAGTTACTTGTGCCGCAGATCATAGCAAAACATGTGCCCCATCTTCGTGCGGCAAAGTCACCGACATAAGGCATCCTTTCCGGCGAAAGGATGACCCAGAAAACTGCGGCGATCGGAGGTACGAGCTGACTTGCGAGAATAACGTCACCGTGCTAGCTTTGTTCCCGGGGAAAAACTACCATGTTGAATCAATAAACTACAATAACTTCACAATCCGACTCGTAGATCCTTCCATGGACTCATCAGAGGATCATAATTGTTCCACCCTTCCTCGCTACTCCATAACCCGTACCAATTTCAGCAACACAGAAACAGAACCATATGTATATGAAGCCCGTCAAGTACGAGAGACCTTGCTTAAGAATGGGGGCATGGTAAGGGAAACTTTACAATCATTCGAGCACGTGGTTTTCTTGAAATGCAGAAATCCGGTGAGGGACGATCCACGACACGTGGACACTGCTCCTTGCATCAAAGAAGGCGGCAATAATGTTTATGCTGTTGTTGGAGGGTTGCCGGTGGTTGAATTAAGAGATGATTGCGATGTGAAGCTGGTTGCTGCCTCATCATTATTATCGGTTAGCATGAATCAAAACTTTTCATACGCTGATATTCGTAGGATGCTTGCTTACGGATTTGAAGTTTCCTGGATACCTGGTGCTTGTGAATATCAGTGTGGGCAGAATAACAGAGTTTGCGTAATCGATGGAATCTTTCAAAGTCTCAAATGTAACTACACCGGAGTCTGTTTCACTCCACTGCTGAAAAACTATTGTGGACTTCGCAAAGTAGTAGGAAAAGATAGTACTGGTGATTACTTCTATCAAATCATTAAAACGGATGTATTCAGAAAATGTATTTTGAAGATGGGAGTATTCACAGGATGGTTTATGGTGCCATACATGGTCGTCAAATTCATATTGAGTCTCGCATTTTTCTTGGTATTGTTGATCTACTCATACCAAAGAAGACATGCATCAATTTGTGATAACATTGAGGAATTTTTGCAAGGGAACAAACTCATTCCAATAAGGTATTCATATAAAGAGATAAAAAAGATGGCAAGAGGTTTTAAGGAAAAGTTGGGAGAAGGAGGATTCGGCTCCGTGCACAAGGGAAAACTACGAAGTGGACCCTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAAGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCTAATGTAGTAAGGTTGATTGGATTCTGCGTAGAGGGTTCAAAACGCGCTCTTGTATATGAATTTATGCCAAATGGTTCTCTAGATAAGTTTATCTTCTCCAAAGTGGATAATGTATCATTAACATACCAGAAACTTTTTGAAATATCTCTTGGCGTGGCTCGTGGCATAGCTTATCTACACGAAGGTTGTGACATGCAGATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTAGACGAGAACTTCATTCCTAAGGTGTCAGACTTTGGTCTTGCAAAACTTTATCCTCTTGATAACAGTATTGTAACTTTGACAGCAGCAAGAGGAACCATTGGTTACATGGCCCCGGAATTATTCTACCAAAATATTGGAGCAGTATCTTATAAGGCCGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAATTCAAACCCAAACGCAGAGCATTCAAGCCAATTTTACTTTCCATTTTGGATATACGATCAATTGGCTAAGAAAAGTGATGAGATAGAGATAGAAATTTTGATGGATGAAGAAACGAACAAACTAGCAAAAAAGATGTTCATAACTGCACTATGGTGTATACAATTGAAGCCAAGTGATCGTCCTTCAATGAATAAAGTGGTGAAAATGTTAGAAGGGGATGTTGCAAGCATTGAAATGCCTCCGAGACCTTCATATTATCCAAATGATATGATTCACAAAGATTCTGAGATTAATTCAGGAGTAACTACTTCAAATGATTCTTCTAGTTGTTCAGATTTTGAGGAGGAAATTACAACCAATCCTATGTGGAAGTGCTTTGGTTGA 2199 0.3997 MTLAFLEGNPSVNKCKDNFVLTVLNKGRKAFSISYFCCFLLHFLLTITVTCAADHSKTCAPSSCGKVTDIRHPFRRKDDPENCGDRRYELTCENNVTVLALFPGKNYHVESINYNNFTIRLVDPSMDSSEDHNCSTLPRYSITRTNFSNTETEPYVYEARQVRETLLKNGGMVRETLQSFEHVVFLKCRNPVRDDPRHVDTAPCIKEGGNNVYAVVGGLPVVELRDDCDVKLVAASSLLSVSMNQNFSYADIRRMLAYGFEVSWIPGACEYQCGQNNRVCVIDGIFQSLKCNYTGVCFTPLLKNYCGLRKVVGKDSTGDYFYQIIKTDVFRKCILKMGVFTGWFMVPYMVVKFILSLAFFLVLLIYSYQRRHASICDNIEEFLQGNKLIPIRYSYKEIKKMARGFKEKLGEGGFGSVHKGKLRSGPFVAIKMLGKAKGNGQDFISEVATIGRIHHANVVRLIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDNVSLTYQKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEMASQRRNSNPNAEHSSQFYFPFWIYDQLAKKSDEIEIEILMDEETNKLAKKMFITALWCIQLKPSDRPSMNKVVKMLEGDVASIEMPPRPSYYPNDMIHKDSEINSGVTTSNDSSSCSDFEEEITTNPMWKCFG 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04171 732 Gene3D Phosphorylase Kinase; domain 1 381 477 - -
Arst6g04171 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Arst6g04171 732 CDD STKc_IRAK 409 677 - -
Arst6g04171 732 Gene3D Transferase(Phosphotransferase) domain 1 478 683 - -
Arst6g04171 732 SMART serkin_6 403 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04171 732 ProSiteProfiles Protein kinase domain profile. 403 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04171 732 PANTHER RUST RESISTANCE KINASE LR10-RELATED 373 696 IPR045874 GO:0004672
Arst6g04171 732 FunFam serine/threonine-protein kinase PBS1-like 374 477 - -
Arst6g04171 732 Pfam Protein tyrosine and serine/threonine kinase 405 675 IPR001245 GO:0004672|GO:0006468
Arst6g04171 732 Pfam Wall-associated receptor kinase galacturonan-binding 59 123 IPR025287 GO:0030247
Arst6g04171 732 FunFam PR5-like receptor kinase 478 686 - -
Arst6g04171 732 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Arst6g04171 732 SUPERFAMILY Protein kinase-like (PK-like) 390 676 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04171 Arst-Chr6 109805487 109810050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04171 32 691 Receptor kinase-like Gene Family AT5G38260 34.853 8.80e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04171 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04171 - - adu:110273082 1479.15