Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04169 ATGAAGGTATCGGCATTGTTTCTGCTGCTGCTTCTAAATCTGAATCTTGGGAACTGCCAGCTGGATCAGCATCCTCCGGTTCCATGTCCGTTCCATTTGTACTGTGAAAAAAACAAAGACAGTTTTGTTCTTGAGCTAACCGGCTCTTCATCTTTAGTGAAACTCCCCGTCCGTCAAATTGATTACACATCACAAACTTTACAAATTTATGATCCCAAACACTGCCTTCCAGAACTCTTTCTCACACTGAATTACTCATCATTTTATCCTTTCCGATCCTATAGAGAGTTTTTCGACGATATGGAACTTTCTCTTGACGGTGAGACCAACCTTACTTTCTTTAATTGTTCTTCGACAGACTCCGACTCCCAGGAACAAGATACTTTATCTTGCCCGATTCGTGTGGCTGGCGATGAAGACGCCGTCGACTCAGGCTTGGTCTCCTGCACAAAACTGGTTACTAATCTTATGCAATTAAGGCCAAATCTGATACAGGGAAATTCAATCAACTTGGTATGGGATAATACAAGTTTTCCTAGTGGCCATGGATGCTTTGTTGGCTGTAACAGAGGGAAGCCTAAAGCATGGAAGGAGTATCAACCCATTATTTTACCCATTACAGGTGCAGCTCTCCTTGTGTCAATACTCGGTGCCTTGTATTATATACATCGCTATTACATAAACAAAGGGGAAGATCAACAAAGAGTTGAAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACAAGATTCTCTTATGCTGATATCAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGTGCTCACGGAGCTGTATATAAAGGAAAATTGTCCAACAAAATTCTTGTTGCTGTCAAGATTCTCACTAACACAGACGGCGATGGCAAAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATTGCTTCGTCCAGCGACAAGGAAAACTTTCTTGGATGGAACAAGATGCATCAGATTGCTCTCGGCATAGCTAGAGGGATTGAATACCTTCACCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATGACAATTTCACTCCAAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAAAATCGAAGTACTGTATCCATGACTGCGGCAAGGGGAACTTTAGGATACATGGCGCCTGAAGTTTTTTCTAGAAACTTCGGCAACGTATCTTACAAATCCGATATCTACAGTTATGGGATGTTATTGCTTGAGATGGTTGGAGGAAGAAAAAACACAAACGAGAATCAAGAAACATTTCAAGTTCTATATCCCAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCAGTTGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCACCGTCCCTCCATGAAAAGTGTAGTTCATATGCTTGAAGGAGAGGAAGACAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCCGCTGAGAGTAGTTCAAGTGCAAATATTCCAGCAAGATGCTTGAATTTGGAACTGGAAGTGATTCCAGAAACAGACTAG 1719 0.4148 MKVSALFLLLLLNLNLGNCQLDQHPPVPCPFHLYCEKNKDSFVLELTGSSSLVKLPVRQIDYTSQTLQIYDPKHCLPELFLTLNYSSFYPFRSYREFFDDMELSLDGETNLTFFNCSSTDSDSQEQDTLSCPIRVAGDEDAVDSGLVSCTKLVTNLMQLRPNLIQGNSINLVWDNTSFPSGHGCFVGCNRGKPKAWKEYQPIILPITGAALLVSILGALYYIHRYYINKGEDQQRVETFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNKILVAVKILTNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIASSSDKENFLGWNKMHQIALGIARGIEYLHQGCDQRILHFDINPYNVLLDDNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNENQETFQVLYPNWIHNLLEGDDTYIPVDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVHMLEGEEDKLKVPPNPFESAAESSSSANIPARCLNLELEVIPETD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04169 572 PANTHER RUST RESISTANCE KINASE LR10-RELATED 232 549 IPR045874 GO:0004672
Arst6g04169 572 FunFam PR5-like receptor kinase 336 542 - -
Arst6g04169 572 Gene3D Transferase(Phosphotransferase) domain 1 336 544 - -
Arst6g04169 572 Pfam Protein tyrosine and serine/threonine kinase 263 529 IPR001245 GO:0004672|GO:0006468
Arst6g04169 572 Gene3D Phosphorylase Kinase; domain 1 234 335 - -
Arst6g04169 572 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Arst6g04169 572 ProSiteProfiles Protein kinase domain profile. 261 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04169 572 FunFam serine/threonine-protein kinase PBS1-like 229 335 - -
Arst6g04169 572 SUPERFAMILY Protein kinase-like (PK-like) 241 531 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04169 Arst-Chr6 109777843 109779724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04169 206 543 Receptor kinase-like Gene Family AT1G66910 46.243 4.62e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04169 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04169 - - adu:107495716 812.757