Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04168 ATGAAAAGAGGGGAAGGCTTCTCCTGCTCACTCTTAAACTACTTGCTCCTAATTACCATAGTTGCATCCGCCGCCGTGGGTCATAACAGAAGATGTGCTCCATCTGCGTGCGGCAAAGTTACCAACATAACGCATCCTTTCCGGCTGAAGGATGACCCAGAATATTGTGGCGATCGGAGGTATGAGCTGGCTTGCGAGAATAACATCGCGGTGCTAGCTTTGTTCCCGGGGAAAAACTACCATGTTCAATCAATAAATTACAATAACTACACAATCCGACTCGTAGATCCCGGGATCTTAGAGGATGATTGTTCCACCCTTCCTAACTATTCCATATCCAATTCCTATTTGACGAATGAAGATGCAAGGGAACCATATGAAGACAATCAAAAGCGAGAGAGTGCTTTAGATAATGGCATGTCCAGATCCTTAACAGTATTCTGTAACGTGGTTTTCTTGGAGTGCAGCAATCCGGTGAGGGACGATCCACGATACGTGGACACTGCACCTTGCGTTAAACAAGGCCGCAATTTTTATGCTGTTTTTGGATACATGTGGGTGCATGAATTAAAAGATGATTGCAGTGTGAAGCTGGTTGCTGCCACATCATCCTTTCCTGCTCCACCGAGATGGCCATATGATCAATCATTCTTGAGATGCGGCCAAAACTATTCATACACTGAGATTCATAGGATGCTCAGTTATGGATTTGAGGTTTCGTGGCTACCTGGTGTTTGTGAGTGTGGACCGAGGAGGTCTTGCATAATTGACGAAACCGCTCGAAGTGGTATCTCATGTTACGGCGGCGAAAACTGTTACACTCCAATTCTGATGGCCGAATGTGGAAAGGTGTCGAAGCTCCAAATAATCGCAGAAGATTACGCGTATGGAATTTTGAAAGGACTTCGAAAAGTAGTAGGAAAAGATGGTGGTGATACCTTCTATAAAGCAGATGTATTAGCTATTATTAAGCTAGGAGTTTTCACGGGACGGGTTATGGTGCCATACATGGTCGTCAAATTCATATCAGGTCTCGTGTTTTTCTTCATAATGTTGATCTACATAAGCCAAAGAAGACATGCATCAATTTATGAAAATATTGAGGAATTTTTGCAAGGGAACAAACTCATTCCAATAAGATATTCATATAAAGAGATAAAGCAGATGACAAGAGATTTTAAGGAAAAATTGGGAGAAGGAGGATTTGGCTCAGTATACAAGGGAAAGTTACGAAGTGGACCCTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAGGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTAGTAAGATTGGTTGGATTTTGTGTAGAGGGTTCAAAACGCGCTCTTGTATACGAATTTATGTCGAATGGTTCTCTAGATAAATTTATCTTCTCCAAAGTGGATAGTGTATCATTGACTTACCAGGAACTTTTTGAAATATCTCTTGGAGTGGCTCGTGGTATAGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGACGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAGCTTAATCCTCTGGATAACAGTATTGTTTCTTTGAAAACAGCAAGAGGAACCCTTGGTTACATGGCCCCAGAATTGTTCTATAAAAATATTGGTGCAATATCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTCGAATCCAAACGCAGAGCATTCAAGCCAATTTTACTTTCCATTTTGGATATATGATCAATTGGCTCAGAAAAGTGATGAGATAAAGGTGGAAATTTTGATGCATGAAGAAACAAGCGAATTAGCAAAAAAGATGTTTACAACTGCGCTGTGGTGTATACAATTGAAGCCAAGTGATCGTCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGAAGCTGCAAATATTGAAATGCCTCCAAAGCCTTCATATTATCCAAATGATATTATCCACGGAGATTCTGAGATTAACTCAGGAGAAGCTACTTCAAATAATTCTTCTGGCTCTTCGGGTTTTGAGGAGGAAATTGCAACTAACCCTCTGTTAATGTTTTCTGGATGA 2163 0.405 MKRGEGFSCSLLNYLLLITIVASAAVGHNRRCAPSACGKVTNITHPFRLKDDPEYCGDRRYELACENNIAVLALFPGKNYHVQSINYNNYTIRLVDPGILEDDCSTLPNYSISNSYLTNEDAREPYEDNQKRESALDNGMSRSLTVFCNVVFLECSNPVRDDPRYVDTAPCVKQGRNFYAVFGYMWVHELKDDCSVKLVAATSSFPAPPRWPYDQSFLRCGQNYSYTEIHRMLSYGFEVSWLPGVCECGPRRSCIIDETARSGISCYGGENCYTPILMAECGKVSKLQIIAEDYAYGILKGLRKVVGKDGGDTFYKADVLAIIKLGVFTGRVMVPYMVVKFISGLVFFFIMLIYISQRRHASIYENIEEFLQGNKLIPIRYSYKEIKQMTRDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKGNGQDFISEVATIGRIHHANVVRLVGFCVEGSKRALVYEFMSNGSLDKFIFSKVDSVSLTYQELFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVSLKTARGTLGYMAPELFYKNIGAISYKADVYSFGMLLMEMASQRRNSNPNAEHSSQFYFPFWIYDQLAQKSDEIKVEILMHEETSELAKKMFTTALWCIQLKPSDRPSMNKVVEMLEGEAANIEMPPKPSYYPNDIIHGDSEINSGEATSNNSSGSSGFEEEIATNPLLMFSG 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04168 720 PANTHER RUST RESISTANCE KINASE LR10-RELATED 364 687 IPR045874 GO:0004672
Arst6g04168 720 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Arst6g04168 720 ProSiteProfiles Protein kinase domain profile. 391 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04168 720 MobiDBLite consensus disorder prediction 690 706 - -
Arst6g04168 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Arst6g04168 720 SMART serkin_6 391 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g04168 720 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524
Arst6g04168 720 Gene3D Phosphorylase Kinase; domain 1 368 465 - -
Arst6g04168 720 Gene3D Transferase(Phosphotransferase) domain 1 466 673 - -
Arst6g04168 720 SUPERFAMILY Protein kinase-like (PK-like) 377 664 IPR011009 -
Arst6g04168 720 FunFam PR5-like receptor kinase 466 675 - -
Arst6g04168 720 FunFam serine/threonine-protein kinase PBS1-like 360 465 - -
Arst6g04168 720 MobiDBLite consensus disorder prediction 683 706 - -
Arst6g04168 720 Pfam Protein kinase domain 393 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04168 Arst-Chr6 109757791 109762923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04168 7 679 Receptor kinase-like Gene Family AT5G38260 33.619 6.54e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst6g04168 Pkinase 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04168 - - adu:110273082 975.311