Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04156 ATGAATCTTATGATGATATCTTTGAAACTACTTTTGTTCATGAATTTGTCCATCATCATCATCACATGCAAGGCCAATCCTAACCAACAAGGTGAACACCTCTCTAAGTTCATTCATTCAAAGAGGTCTCAAAATAATAATAACAACAATCCATCATCATCATCATCATTGGAAGCTTTCCATTCTCATCTTCCACAACTACATGTTGATGATGATGATGATGAACAATCTAAGCTTAAAGAAGATGATAAAGTTGAAGGTCTACCAGGACAACCTGAAGGAGTGGATTTTGATCAATATGCTGGCTATATAACTCTTGATGCAAACAAAGGGAAAGCACTCTTCTACTACTTTGTTGAGTCACCTCAAAATTCTTCCACCAACCCTCTTCTTCTATGGCTCAATGGAGGGCCAGGGTGCTCTTCTCTGGGGTTTGGAGCAATGGAAGAATTGGGACCTTTTAGAATCAATAGTGATGGAAGAACACTTTACAGAAATCCATATGCATGGAACAATGTTGCAAACGTGATTTTCCTAGAATCACCAGCAGGTGTTGGATTTTCATATTCAAAAACTTCCTCGGACTATGCTAAAATTGGCGACAGCATCACCGCCTTGGATTCTTACACATTCCTTGTGAAGTGGCTTGAGAGATTCCCACACTACAAAACACGTGACTTCTTCATAACTGGAGAAAGCTATGCTGGCCATTATGTCCCTCAGCTTGCTCACACTATTCTCTCATATAATAACATTGCAGCGTCAAATCATCAAACAGTTATCAACTTAAAAGGAATTGCGGTTGGAAATGGATGGATAGATGATAATTTGTGTACAAAGGGTATGTATGATTATTATTGGTCACATGCTCTAAGCTCTGACGAATCACATTCTGGAATTGAAAAAAATTGTGACTATGTTAGCGGTAATTTCTCTAATGAATGCATCAAATATATGAACATGGCTGATGTTGAAGTTGGTGATATTGACATATACAACATATATGCTCCACTTTGTGATTCTTCATCTTCATCAAAATCTCCTGGCAATGATTTCGACCCTTGTTCTGATCATTACACAAAGTCCTACTTGAATCTCCCAGAAGTTCAAAAGGCCCTTCATGCTAAAGCCACAAATTGGTCTTCTTGCAGCCTGGTGGGATGGACGGATAGTCCAGCAAGTATTCTACCAACTATAAATAGATTAATATCAAGTAACATAAGCATCTGGATTTATAGTGGCGATACAGATGGTCGAGTTCCCATAACTTCATCTAGGTATTCAATAAATGCCCTCAAACTTCCAGTACAGACACCTTGGCGTTCATGGTATTCTGCCAATCAGGTTGGAGGATATGTTGTTGGGTATAAAGGGCTCACTCTTGTAACTGTAAGAGGAGCAGGGCACACTGTTCCAAGCTACCAACCTCAGAGGGCTCTAACCATGATCTCATATTTTCTCAATGGAGAACTTCCACCAAAGAATTAA 1488 0.3911 MNLMMISLKLLLFMNLSIIIITCKANPNQQGEHLSKFIHSKRSQNNNNNNPSSSSSLEAFHSHLPQLHVDDDDDEQSKLKEDDKVEGLPGQPEGVDFDQYAGYITLDANKGKALFYYFVESPQNSSTNPLLLWLNGGPGCSSLGFGAMEELGPFRINSDGRTLYRNPYAWNNVANVIFLESPAGVGFSYSKTSSDYAKIGDSITALDSYTFLVKWLERFPHYKTRDFFITGESYAGHYVPQLAHTILSYNNIAASNHQTVINLKGIAVGNGWIDDNLCTKGMYDYYWSHALSSDESHSGIEKNCDYVSGNFSNECIKYMNMADVEVGDIDIYNIYAPLCDSSSSSKSPGNDFDPCSDHYTKSYLNLPEVQKALHAKATNWSSCSLVGWTDSPASILPTINRLISSNISIWIYSGDTDGRVPITSSRYSINALKLPVQTPWRSWYSANQVGGYVVGYKGLTLVTVRGAGHTVPSYQPQRALTMISYFLNGELPPKN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04156 495 Gene3D alpha/beta hydrolase 76 350 IPR029058 -
Arst6g04156 495 FunFam Carboxypeptidase 79 341 - -
Arst6g04156 495 Gene3D - 355 386 - -
Arst6g04156 495 Gene3D - 395 489 - -
Arst6g04156 495 FunFam Carboxypeptidase 352 491 - -
Arst6g04156 495 SUPERFAMILY alpha/beta-Hydrolases 85 490 IPR029058 -
Arst6g04156 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 476 IPR001563 GO:0004185|GO:0006508
Arst6g04156 495 MobiDBLite consensus disorder prediction 68 93 - -
Arst6g04156 495 Pfam Serine carboxypeptidase 89 489 IPR001563 GO:0004185|GO:0006508
Arst6g04156 495 FunFam Carboxypeptidase 395 489 - -
Arst6g04156 495 MobiDBLite consensus disorder prediction 68 89 - -
Arst6g04156 495 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Arst6g04156 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Arst6g04156 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Arst6g04156 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Arst6g04156 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Arst6g04156 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04156 Arst-Chr6 109635462 109641398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04156 360 490 Calmodulin-binding Proteins AT2G22960 31.387 6.47e-12 62.8