Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04154 ATGAATCTTATGATGATATCTTTGAAACTACTTTTGTTCATGAATTTGTCCATCATCATCATCACATGCAAGGCCAATCCTAACCAACAAGGACAACCTGAAGGAGTGGATTTTGATCAATATGCTGGCTATATAACTCTTGATGCAAACAAAGGGAAAGCACTCTTCTACTACTTTGTTGAGTCACCTCAAAATTCTTCCACCAACCCTCTTCTTCTATGGCTCAATGGAGGGCCAGGGTGCTCTTCTCTGGGGTTTGGAGCAATGGAAGAATTGGGACCTTTTAGAATCAATAGTGATGGAAGAACACTTTACAGAAATCCATATGCATGGAACAATGTTGCAAACGTGATTTTCCTAGAATCACCAGCAGGTGTTGGATTTTCATATTCAAAAACTTCCTCGGACTATGCTAAAATTGGCGACAGCATCACCGCCTTGGATTCTTACACATTCCTTGTGAAGTGGCTTGAGAGATTCCCACACTACAAAACACGTGACTTCTTCATAACTGGAGAAAGCTATGCTGGCCATTATGTCCCTCAGCTTGCTCACACTATTCTCTCATATAATAACATTGCAGCGTCAAATCATCAAACAGTTATCAACTTAAAAGGAATTGCGGTTGGAAATGGATGGATAGATGATAATTTGTGTACAAAGGGTATGTATGATTATTATTGGTCACATGCTCTAAGCTCTGACGAATCACATTCTGGAATTGAAAAAAATTGTGACTATGTTAGCGGTAATTTCTCTAATGAATGCATCAAATATATGAACATGGCTGATGTTGAAGTTGGTGATATTGACATATACAACATATATGCTCCACTTTGTGATTCTTCATCTTCATCAAAATCTCCTGGCAATGATTTCGACCCTTGTTCTGATCATTACACAAAGTCCTACTTGAATCTCCCAGAAGTTCAAAAGGCCCTTCATGCTAAAGCCACAAATTGGTCTTCTTGCAGCCTGGTGGGATGGACGGATAGTCCAGCAAGTATTCTACCAACTATAAATAGATTAATATCAAGTAACATAAGCATCTGGATTTATAGTGGCGATACAGATGGTCGAGTTCCCATAACTTCATCTAGGTATTCAATAAATGCCCTCAAACTTCCAGTACAGACACCTTGGCGTTCATGGTATTCTGCCAATCAGGTTGGAGGATATGTTGTTGGGTATAAAGGGCTCACTCTTGTAACTGTAAGAGGAGCAGGGCACACTGTTCCAAGCTACCAACCTCAGAGGGCTCTAACCATGATCTCATATTTTCTCAATGGAGAACTTCCACCAAAGAATTAA 1311 0.3974 MNLMMISLKLLLFMNLSIIIITCKANPNQQGQPEGVDFDQYAGYITLDANKGKALFYYFVESPQNSSTNPLLLWLNGGPGCSSLGFGAMEELGPFRINSDGRTLYRNPYAWNNVANVIFLESPAGVGFSYSKTSSDYAKIGDSITALDSYTFLVKWLERFPHYKTRDFFITGESYAGHYVPQLAHTILSYNNIAASNHQTVINLKGIAVGNGWIDDNLCTKGMYDYYWSHALSSDESHSGIEKNCDYVSGNFSNECIKYMNMADVEVGDIDIYNIYAPLCDSSSSSKSPGNDFDPCSDHYTKSYLNLPEVQKALHAKATNWSSCSLVGWTDSPASILPTINRLISSNISIWIYSGDTDGRVPITSSRYSINALKLPVQTPWRSWYSANQVGGYVVGYKGLTLVTVRGAGHTVPSYQPQRALTMISYFLNGELPPKN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04154 436 Gene3D - 336 430 - -
Arst6g04154 436 Gene3D - 296 327 - -
Arst6g04154 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 Pfam Serine carboxypeptidase 35 430 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 ProSitePatterns Serine carboxypeptidases, histidine active site. 400 417 IPR033124 GO:0004185
Arst6g04154 436 ProSitePatterns Serine carboxypeptidases, serine active site. 170 177 IPR018202 GO:0004185
Arst6g04154 436 Gene3D alpha/beta hydrolase 27 282 IPR029058 -
Arst6g04154 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 417 IPR001563 GO:0004185|GO:0006508
Arst6g04154 436 FunFam Carboxypeptidase 26 282 - -
Arst6g04154 436 FunFam Carboxypeptidase 336 430 - -
Arst6g04154 436 SUPERFAMILY alpha/beta-Hydrolases 29 431 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04154 Arst-Chr6 109635462 109641398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04154 301 431 Calmodulin-binding Proteins AT2G22960 31.387 4.21e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04154 K16297 - gmx:100818983 653.669