Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04137 ATGACTATGACTCTGTCTTTGTTTGAAAATTTTCGATTTATAGAGATTGAAAAAATTCTAAATTCTTTCCAGGTCAGGAGCATGGAGGAAGGCTTTCAGGGATCATGGCACCCGGGGAAAGTTGTCCATTCTGGGAGGCTGCAGCGCCATGTCAAATATGATAACATATTACTTGATGATGAGGTGAATTACCTTGTGGAAAAGGTGAGTATTCCGAAGGTATTGGATGGCGATAGCGACTCTTCAAATTGCAACATTCGTGGTTGGATTAGGCCGGTGCCTCCTAAGAGGGAATTTGAAAGTAGGGAACTTAAATTTGGTCTGTGTGTTGATGTGTACCATGAAGAAGCTTGGTGGGAAGGGGTTATATTTGATCACTGTGATGAAAAGCCAGAGAGGAGTGTATATTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCATCAAATGCGGATAACTTATGATTGGAATGAGGTTACTGGGGAGTGGCAGTCGAGAGGGAACTGGGTTTTTCTTGAAGTTCTTGAGGAGTATGAGAGGAAGATGTTTATTTCAGTTTCAGTGAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGACTTCGCCAAGATTAGGGAATGGACTTTTAATGAGAAAGTGTTATGGAAAAAAATGGTAATGGAGGTAGTTGATGATTACTTAAGGCTCATACTAGGAGAAGTTTGCTCCTCCTTAGATCTTCCAAGGAGTTTATTGAGAGAAACACCGGAGATGGAGTCTGTTGAATCTACTGCTAATGTTGACTTCAATCAGGCCAACTCTTTGGATGTTGCGAATTCTGCAGGCCAGTCGAGTAGCATTTGTATCACAACTGCTTCTGATGATGGGATTGCTGAACTCCCTATGGAAGGAGGTGAGTCATCGAATTTGTTGAACATGGATCAAAAGTGGCCTACCATTCAGGATCAAGGGGTCAAAACTGTCCCTCAGAAAGAACCAGTTACTCCTGTTCAAGAGGTCTCAACTCAGTTTCACAAAGAATGTGAAATATCCTGCGATGGTGCTACTGAAGTAATATTTAATGGAAGAAAACATAGAAAGCTTCGCAGCTCAACTCAACATTGGGAACCTCTCAGATTGTCTGACGTTGAGTTATGTCCTGATGCTATTGAAGAATATGCACAGGCCCCTAAAAGAGCTTGCCCGGAAAAAGCACGAAAACATCTTGCCCATCTTGGATGGAAAATTGAGTGGAGAAAGCATAAAACAAGCGACACTTGCTATAGGTACAGATATAGGTCGCCTGATAAACAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGAACCTATTCTTATTGATCAATCAGAAAAGAGTCAGGATCAGAGTGCGATGCAACTTAGAGATGACAATCATCTTGCACCTATTTGTATTGATCAATCAGAAAAGAGTCATGATCTAAATATTTTGCCACCAATTGTGTCGTCTCCTGTGGATGAAGTTGCAGGTGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATCTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGGTTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCCCAACACTCCATGCAGCTTGCCATTATTGTATTGAACAAAATGTTGATAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTTCGAGAGGAACGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATGGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATGTACTCTCTTGGTTGATAGACAATAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCAGGCTCTGTTCAGCTGAAGGGAGAATAAGCAGAGATGGAATCAAGTGTAATTGTTGTTTGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAATGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCAAAATATTTTCCTAAAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGGTGTGGAGGTAACTAATAATATTCTTCCTCAATCTCATCATATTTGGTTGCATCTTGTTATTGATATCTTAATTCAATTCACCACTTTCATTCAACAATTGCTGTTGGAACTGAATTGTTTCCTCTTGCTGCCTTCATTTTTTTTCCTGTACAGAACATTCCTGAAGATCTGGTTTTGCCCATCATGTCGATGTGCAGTTTGTGGCGAAATAGAAGAAGAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAGATATAGTAAAAACTGGTTCTGCGGAAGGGACTGTGAAAAGATATATTTTGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCATTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCTGAGAGTAGTGATCCGTGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCTCAGTGATGCATGAATGTTTTGAGCCCCTAAAGGATCCTTCGTCTACCAGAGATCTCATGGAAGATGTTTTATTCAGTCGATGGTCAACACTTAATCGATTGAATTTCCATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTACGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGTACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTTTGATGAATGAGCTTGAAAAGACGCTCATGCAGTTGGGAGTGGAGAGGCTCGTTTTGCCTGCTGTTCCTAGTGTTGTAGACACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAGAGTTCGAGAGGTCGCAATTCTTGGACAATACTTTTTTAGATTTTCAGGATACCATTATGTGCCAGAAGCTGCTGAAGATTCCATCTCCAGAATCGGTTTTGTTAATAGGTTTGTAA 3495 0.4106 MTMTLSLFENFRFIEIEKILNSFQVRSMEEGFQGSWHPGKVVHSGRLQRHVKYDNILLDDEVNYLVEKVSIPKVLDGDSDSSNCNIRGWIRPVPPKREFESRELKFGLCVDVYHEEAWWEGVIFDHCDEKPERSVYFPDLGDEMKIGVHQMRITYDWNEVTGEWQSRGNWVFLEVLEEYERKMFISVSVKQVWYDVRTKKDFAKIREWTFNEKVLWKKMVMEVVDDYLRLILGEVCSSLDLPRSLLRETPEMESVESTANVDFNQANSLDVANSAGQSSSICITTASDDGIAELPMEGGESSNLLNMDQKWPTIQDQGVKTVPQKEPVTPVQEVSTQFHKECEISCDGATEVIFNGRKHRKLRSSTQHWEPLRLSDVELCPDAIEEYAQAPKRACPEKARKHLAHLGWKIEWRKHKTSDTCYRYRYRSPDKQGVYYSLSRVCKYVAQNPLPSQNDQSMMQLTADNHLEPILIDQSEKSQDQSAMQLRDDNHLAPICIDQSEKSHDLNILPPIVSSPVDEVAGEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLPTLHAACHYCIEQNVDKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLREERMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNGLPRRVLRSNKRVQKVSTPSLSHQKPQNVLSWLIDNNILLPRSKVSYKPKGRLCSAEGRISRDGIKCNCCLKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKMVEDHMTREAMAKPPKYFPKGENDNICSVCHYGGNLILCDQCPSSFHVTCLGVEVTNNILPQSHHIWLHLVIDILIQFTTFIQQLLLELNCFLLLPSFFFLYRTFLKIWFCPSCRCAVCGEIEEEEGDFLVCIQCEHKYHFKCLRTKYATNSRRYSKNWFCGRDCEKIYFGLHKLLGEPVSVGINNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALSVMHECFEPLKDPSSTRDLMEDVLFSRWSTLNRLNFHGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRILMNELEKTLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTEFERSQFLDNTFLDFQDTIMCQKLLKIPSPESVLLIGL 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04137 1164 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1000 1128 IPR016181 -
Arst6g04137 1164 SUPERFAMILY FYVE/PHD zinc finger 899 945 IPR011011 -
Arst6g04137 1164 PANTHER PHD FINGER PROTEIN 12 892 1155 IPR042163 GO:0003714|GO:0045892
Arst6g04137 1164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 899 951 IPR013083 -
Arst6g04137 1164 SMART PHD_3 899 948 IPR001965 -
Arst6g04137 1164 SMART PHD_3 809 898 IPR001965 -
Arst6g04137 1164 Pfam Tify domain binding domain 732 783 IPR032308 -
Arst6g04137 1164 CDD NAT_SF 1046 1106 - -
Arst6g04137 1164 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1006 1151 IPR000182 GO:0016747
Arst6g04137 1164 SUPERFAMILY FYVE/PHD zinc finger 803 841 IPR011011 -
Arst6g04137 1164 Gene3D - 1007 1150 - -
Arst6g04137 1164 Pfam Agenet domain 25 95 IPR008395 -
Arst6g04137 1164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 804 898 IPR013083 -
Arst6g04137 1164 MobiDBLite consensus disorder prediction 645 676 - -
Arst6g04137 1164 CDD Tudor_Agenet_AtDUF_rpt1_3 25 95 - -
Arst6g04137 1164 Pfam PHD-finger 898 945 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04137 Arst-Chr6 109499566 109506248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04137 5 447 PHD Transcription Factor Family AT5G58610 31.849 8.14e-63 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst6g04137 Agenet 2.9e-11 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04137 - - aip:107644722 1540.01